Gene : Potri.T126100 P. trichocarpa v3.1
Defline:  (1 of 6) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  1
Name:  ? Potri.T126100 Secondary Identifier:  ? PAC:37232636
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-2541 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T126100 0.5kb upstream 0.5kb upstream 4478 true scaffold_226: 35-4512 Populus trichocarpa
Potri.T126100 0.5kb upstream 0.5kb upstream 500 false scaffold_226: 4013-4512 Populus trichocarpa
Potri.T126100 0.5kb downstream 0.5kb downstream 4012 true scaffold_226: 1-4012 Populus trichocarpa
Potri.T126100 0.5kb downstream 0.5kb downstream 34 false scaffold_226: 1-34 Populus trichocarpa
Potri.T126100 1.0kb upstream 1.0kb upstream 4978 true scaffold_226: 35-5012 Populus trichocarpa
Potri.T126100 1.0kb upstream 1.0kb upstream 1000 false scaffold_226: 4013-5012 Populus trichocarpa
Potri.T126100 1.0kb downstream 1.0kb downstream 4012 true scaffold_226: 1-4012 Populus trichocarpa
Potri.T126100 1.0kb downstream 1.0kb downstream 34 false scaffold_226: 1-34 Populus trichocarpa
Potri.T126100 2.0kb upstream 2.0kb upstream 5978 true scaffold_226: 35-6012 Populus trichocarpa
Potri.T126100 2.0kb upstream 2.0kb upstream 2000 false scaffold_226: 4013-6012 Populus trichocarpa
Potri.T126100 2.0kb downstream 2.0kb downstream 4012 true scaffold_226: 1-4012 Populus trichocarpa
Potri.T126100 2.0kb downstream 2.0kb downstream 34 false scaffold_226: 1-34 Populus trichocarpa
Potri.T126100 5.0kb upstream 5.0kb upstream 8978 true scaffold_226: 35-9012 Populus trichocarpa
Potri.T126100 5.0kb upstream 5.0kb upstream 5000 false scaffold_226: 4013-9012 Populus trichocarpa
Potri.T126100 5.0kb downstream 5.0kb downstream 4012 true scaffold_226: 1-4012 Populus trichocarpa
Potri.T126100 5.0kb downstream 5.0kb downstream 34 false scaffold_226: 1-34 Populus trichocarpa
Potri.T126100 10.0kb upstream 10.0kb upstream 13978 true scaffold_226: 35-14012 Populus trichocarpa
Potri.T126100 10.0kb upstream 10.0kb upstream 10000 false scaffold_226: 4013-14012 Populus trichocarpa
Potri.T126100 10.0kb downstream 10.0kb downstream 4012 true scaffold_226: 1-4012 Populus trichocarpa
Potri.T126100 10.0kb downstream 10.0kb downstream 34 false scaffold_226: 1-34 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029665 5273 Angiosperm View MSA
122447989 5262 Malpighiales View MSA
124251699 5268 Malvidae View MSA
124074519 5270 Rosid View MSA
123750471 5271 Pentapetalae View MSA
122795887 5272 Eudicot View MSA
121298968 5274 Embryophyte View MSA
123336900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain