Gene : Potri.T005700 P. trichocarpa v3.1
Defline:  (1 of 1) KOG1350 - F0F1-type ATP synthase, beta subunit Genomic Order:  2
Name:  ? Potri.T005700 Secondary Identifier:  ? PAC:37241745
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6126 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7219 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7229 Populus trichocarpa pathologic  
Ptrichocarpa PWY-841 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T005700 0.5kb upstream 0.5kb upstream 2066 true scaffold_21: 435395-437460 Populus trichocarpa
Potri.T005700 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 436961-437460 Populus trichocarpa
Potri.T005700 0.5kb downstream 0.5kb downstream 2066 true scaffold_21: 434895-436960 Populus trichocarpa
Potri.T005700 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 434895-435394 Populus trichocarpa
Potri.T005700 1.0kb upstream 1.0kb upstream 2566 true scaffold_21: 435395-437960 Populus trichocarpa
Potri.T005700 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 436961-437960 Populus trichocarpa
Potri.T005700 1.0kb downstream 1.0kb downstream 2566 true scaffold_21: 434395-436960 Populus trichocarpa
Potri.T005700 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 434395-435394 Populus trichocarpa
Potri.T005700 2.0kb upstream 2.0kb upstream 3566 true scaffold_21: 435395-438960 Populus trichocarpa
Potri.T005700 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 436961-438960 Populus trichocarpa
Potri.T005700 2.0kb downstream 2.0kb downstream 3566 true scaffold_21: 433395-436960 Populus trichocarpa
Potri.T005700 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 433395-435394 Populus trichocarpa
Potri.T005700 5.0kb upstream 5.0kb upstream 6566 true scaffold_21: 435395-441960 Populus trichocarpa
Potri.T005700 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 436961-441960 Populus trichocarpa
Potri.T005700 5.0kb downstream 5.0kb downstream 6566 true scaffold_21: 430395-436960 Populus trichocarpa
Potri.T005700 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 430395-435394 Populus trichocarpa
Potri.T005700 10.0kb upstream 10.0kb upstream 11566 true scaffold_21: 435395-446960 Populus trichocarpa
Potri.T005700 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 436961-446960 Populus trichocarpa
Potri.T005700 10.0kb downstream 10.0kb downstream 11566 true scaffold_21: 425395-436960 Populus trichocarpa
Potri.T005700 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 425395-435394 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122397916 5262 Malpighiales Singleton cluster - no MSA
124194967 5268 Malvidae Singleton cluster - no MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain