Gene : Potri.T079700 P. trichocarpa v3.1
Defline:  (1 of 6) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  6
Name:  ? Potri.T079700 Secondary Identifier:  ? PAC:37269625
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5466 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6824 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.T079700 0.5kb upstream 0.5kb upstream 2683 true scaffold_87: 50641-53323 Populus trichocarpa
Potri.T079700 0.5kb upstream 0.5kb upstream 500 false scaffold_87: 52824-53323 Populus trichocarpa
Potri.T079700 0.5kb downstream 0.5kb downstream 2683 true scaffold_87: 50141-52823 Populus trichocarpa
Potri.T079700 0.5kb downstream 0.5kb downstream 500 false scaffold_87: 50141-50640 Populus trichocarpa
Potri.T079700 1.0kb upstream 1.0kb upstream 3183 true scaffold_87: 50641-53823 Populus trichocarpa
Potri.T079700 1.0kb upstream 1.0kb upstream 1000 false scaffold_87: 52824-53823 Populus trichocarpa
Potri.T079700 1.0kb downstream 1.0kb downstream 3183 true scaffold_87: 49641-52823 Populus trichocarpa
Potri.T079700 1.0kb downstream 1.0kb downstream 1000 false scaffold_87: 49641-50640 Populus trichocarpa
Potri.T079700 2.0kb upstream 2.0kb upstream 4183 true scaffold_87: 50641-54823 Populus trichocarpa
Potri.T079700 2.0kb upstream 2.0kb upstream 2000 false scaffold_87: 52824-54823 Populus trichocarpa
Potri.T079700 2.0kb downstream 2.0kb downstream 4183 true scaffold_87: 48641-52823 Populus trichocarpa
Potri.T079700 2.0kb downstream 2.0kb downstream 2000 false scaffold_87: 48641-50640 Populus trichocarpa
Potri.T079700 5.0kb upstream 5.0kb upstream 7183 true scaffold_87: 50641-57823 Populus trichocarpa
Potri.T079700 5.0kb upstream 5.0kb upstream 5000 false scaffold_87: 52824-57823 Populus trichocarpa
Potri.T079700 5.0kb downstream 5.0kb downstream 7183 true scaffold_87: 45641-52823 Populus trichocarpa
Potri.T079700 5.0kb downstream 5.0kb downstream 5000 false scaffold_87: 45641-50640 Populus trichocarpa
Potri.T079700 10.0kb upstream 10.0kb upstream 12183 true scaffold_87: 50641-62823 Populus trichocarpa
Potri.T079700 10.0kb upstream 10.0kb upstream 10000 false scaffold_87: 52824-62823 Populus trichocarpa
Potri.T079700 10.0kb downstream 10.0kb downstream 12183 true scaffold_87: 40641-52823 Populus trichocarpa
Potri.T079700 10.0kb downstream 10.0kb downstream 10000 false scaffold_87: 40641-50640 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452818 5262 Malpighiales View MSA
124254383 5268 Malvidae View MSA
124065870 5270 Rosid View MSA
123745907 5271 Pentapetalae View MSA
122793198 5272 Eudicot View MSA
122046121 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain