Gene : Podel.13G105100 P. deltoides WV94 v2.1
Defline:  (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  1051
Name:  ? Podel.13G105100 Secondary Identifier:  ? PAC:37335062
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.13G105100 0.5kb upstream 0.5kb upstream 1420 true Chr13: 11228255-11229674 Populus deltoides WV94
Podel.13G105100 0.5kb upstream 0.5kb upstream 500 false Chr13: 11229175-11229674 Populus deltoides WV94
Podel.13G105100 0.5kb downstream 0.5kb downstream 1420 true Chr13: 11227755-11229174 Populus deltoides WV94
Podel.13G105100 0.5kb downstream 0.5kb downstream 500 false Chr13: 11227755-11228254 Populus deltoides WV94
Podel.13G105100 1.0kb upstream 1.0kb upstream 1920 true Chr13: 11228255-11230174 Populus deltoides WV94
Podel.13G105100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 11229175-11230174 Populus deltoides WV94
Podel.13G105100 1.0kb downstream 1.0kb downstream 1920 true Chr13: 11227255-11229174 Populus deltoides WV94
Podel.13G105100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 11227255-11228254 Populus deltoides WV94
Podel.13G105100 2.0kb upstream 2.0kb upstream 2920 true Chr13: 11228255-11231174 Populus deltoides WV94
Podel.13G105100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 11229175-11231174 Populus deltoides WV94
Podel.13G105100 2.0kb downstream 2.0kb downstream 2920 true Chr13: 11226255-11229174 Populus deltoides WV94
Podel.13G105100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 11226255-11228254 Populus deltoides WV94
Podel.13G105100 5.0kb upstream 5.0kb upstream 5920 true Chr13: 11228255-11234174 Populus deltoides WV94
Podel.13G105100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 11229175-11234174 Populus deltoides WV94
Podel.13G105100 5.0kb downstream 5.0kb downstream 5920 true Chr13: 11223255-11229174 Populus deltoides WV94
Podel.13G105100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 11223255-11228254 Populus deltoides WV94
Podel.13G105100 10.0kb upstream 10.0kb upstream 10920 true Chr13: 11228255-11239174 Populus deltoides WV94
Podel.13G105100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 11229175-11239174 Populus deltoides WV94
Podel.13G105100 10.0kb downstream 10.0kb downstream 10920 true Chr13: 11218255-11229174 Populus deltoides WV94
Podel.13G105100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 11218255-11228254 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122406240 5262 Malpighiales View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier