Gene : Podel.04G200700 P. deltoides WV94 v2.1
Defline:  (1 of 2) K14593 - capsanthin/capsorubin synthase (CCS1) Genomic Order:  2007
Name:  ? Podel.04G200700 Secondary Identifier:  ? PAC:37291042
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-6809 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-695 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.04G200700 0.5kb upstream 0.5kb upstream 2282 true Chr04: 20790326-20792607 Populus deltoides WV94
Podel.04G200700 0.5kb upstream 0.5kb upstream 500 false Chr04: 20792108-20792607 Populus deltoides WV94
Podel.04G200700 0.5kb downstream 0.5kb downstream 2282 true Chr04: 20789826-20792107 Populus deltoides WV94
Podel.04G200700 0.5kb downstream 0.5kb downstream 500 false Chr04: 20789826-20790325 Populus deltoides WV94
Podel.04G200700 1.0kb upstream 1.0kb upstream 2782 true Chr04: 20790326-20793107 Populus deltoides WV94
Podel.04G200700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 20792108-20793107 Populus deltoides WV94
Podel.04G200700 1.0kb downstream 1.0kb downstream 2782 true Chr04: 20789326-20792107 Populus deltoides WV94
Podel.04G200700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 20789326-20790325 Populus deltoides WV94
Podel.04G200700 2.0kb upstream 2.0kb upstream 3782 true Chr04: 20790326-20794107 Populus deltoides WV94
Podel.04G200700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 20792108-20794107 Populus deltoides WV94
Podel.04G200700 2.0kb downstream 2.0kb downstream 3782 true Chr04: 20788326-20792107 Populus deltoides WV94
Podel.04G200700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 20788326-20790325 Populus deltoides WV94
Podel.04G200700 5.0kb upstream 5.0kb upstream 6782 true Chr04: 20790326-20797107 Populus deltoides WV94
Podel.04G200700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 20792108-20797107 Populus deltoides WV94
Podel.04G200700 5.0kb downstream 5.0kb downstream 6782 true Chr04: 20785326-20792107 Populus deltoides WV94
Podel.04G200700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 20785326-20790325 Populus deltoides WV94
Podel.04G200700 10.0kb upstream 10.0kb upstream 11782 true Chr04: 20790326-20802107 Populus deltoides WV94
Podel.04G200700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 20792108-20802107 Populus deltoides WV94
Podel.04G200700 10.0kb downstream 10.0kb downstream 11782 true Chr04: 20780326-20792107 Populus deltoides WV94
Podel.04G200700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 20780326-20790325 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448019 5262 Malpighiales View MSA
124246200 5268 Malvidae View MSA
124070716 5270 Rosid View MSA
123749598 5271 Pentapetalae View MSA
122795342 5272 Eudicot View MSA
122048987 5273 Angiosperm View MSA
121311196 5274 Embryophyte View MSA
123348524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier