Gene : Podel.T254300 P. deltoides WV94 v2.1
Defline:  (1 of 16) PTHR31375:SF2 - POLYGALACTURONASE/PECTINASE Genomic Order:  3
Name:  ? Podel.T254300 Secondary Identifier:  ? PAC:37331453
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-1081 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.T254300 0.5kb upstream 0.5kb upstream 2036 true scaffold_739: 19664-21699 Populus deltoides WV94
Podel.T254300 0.5kb upstream 0.5kb upstream 500 false scaffold_739: 21200-21699 Populus deltoides WV94
Podel.T254300 0.5kb downstream 0.5kb downstream 2036 true scaffold_739: 19164-21199 Populus deltoides WV94
Podel.T254300 0.5kb downstream 0.5kb downstream 500 false scaffold_739: 19164-19663 Populus deltoides WV94
Podel.T254300 1.0kb upstream 1.0kb upstream 2536 true scaffold_739: 19664-22199 Populus deltoides WV94
Podel.T254300 1.0kb upstream 1.0kb upstream 1000 false scaffold_739: 21200-22199 Populus deltoides WV94
Podel.T254300 1.0kb downstream 1.0kb downstream 2536 true scaffold_739: 18664-21199 Populus deltoides WV94
Podel.T254300 1.0kb downstream 1.0kb downstream 1000 false scaffold_739: 18664-19663 Populus deltoides WV94
Podel.T254300 2.0kb upstream 2.0kb upstream 3536 true scaffold_739: 19664-23199 Populus deltoides WV94
Podel.T254300 2.0kb upstream 2.0kb upstream 2000 false scaffold_739: 21200-23199 Populus deltoides WV94
Podel.T254300 2.0kb downstream 2.0kb downstream 3536 true scaffold_739: 17664-21199 Populus deltoides WV94
Podel.T254300 2.0kb downstream 2.0kb downstream 2000 false scaffold_739: 17664-19663 Populus deltoides WV94
Podel.T254300 5.0kb upstream 5.0kb upstream 5916 true scaffold_739: 19664-25579 Populus deltoides WV94
Podel.T254300 5.0kb upstream 5.0kb upstream 4380 false scaffold_739: 21200-25579 Populus deltoides WV94
Podel.T254300 5.0kb downstream 5.0kb downstream 6536 true scaffold_739: 14664-21199 Populus deltoides WV94
Podel.T254300 5.0kb downstream 5.0kb downstream 5000 false scaffold_739: 14664-19663 Populus deltoides WV94
Podel.T254300 10.0kb upstream 10.0kb upstream 5916 true scaffold_739: 19664-25579 Populus deltoides WV94
Podel.T254300 10.0kb upstream 10.0kb upstream 4380 false scaffold_739: 21200-25579 Populus deltoides WV94
Podel.T254300 10.0kb downstream 10.0kb downstream 11536 true scaffold_739: 9664-21199 Populus deltoides WV94
Podel.T254300 10.0kb downstream 10.0kb downstream 10000 false scaffold_739: 9664-19663 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427942 5262 Malpighiales View MSA
124252972 5268 Malvidae View MSA
124060937 5270 Rosid View MSA
123747300 5271 Pentapetalae View MSA
122794998 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier