Gene : Podel.04G088300 P. deltoides WV94 v2.1
Defline:  (1 of 2) PTHR31480:SF2 - PHYTOENE SYNTHASE, CHLOROPLASTIC Genomic Order:  883
Name:  ? Podel.04G088300 Secondary Identifier:  ? PAC:37290406
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 CAROTENOID-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6475 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.04G088300 0.5kb upstream 0.5kb upstream 3731 true Chr04: 7817621-7821351 Populus deltoides WV94
Podel.04G088300 0.5kb upstream 0.5kb upstream 500 false Chr04: 7817621-7818120 Populus deltoides WV94
Podel.04G088300 0.5kb downstream 0.5kb downstream 3731 true Chr04: 7818121-7821851 Populus deltoides WV94
Podel.04G088300 0.5kb downstream 0.5kb downstream 500 false Chr04: 7821352-7821851 Populus deltoides WV94
Podel.04G088300 1.0kb upstream 1.0kb upstream 4231 true Chr04: 7817121-7821351 Populus deltoides WV94
Podel.04G088300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 7817121-7818120 Populus deltoides WV94
Podel.04G088300 1.0kb downstream 1.0kb downstream 4231 true Chr04: 7818121-7822351 Populus deltoides WV94
Podel.04G088300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 7821352-7822351 Populus deltoides WV94
Podel.04G088300 2.0kb upstream 2.0kb upstream 5231 true Chr04: 7816121-7821351 Populus deltoides WV94
Podel.04G088300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 7816121-7818120 Populus deltoides WV94
Podel.04G088300 2.0kb downstream 2.0kb downstream 5231 true Chr04: 7818121-7823351 Populus deltoides WV94
Podel.04G088300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 7821352-7823351 Populus deltoides WV94
Podel.04G088300 5.0kb upstream 5.0kb upstream 8231 true Chr04: 7813121-7821351 Populus deltoides WV94
Podel.04G088300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 7813121-7818120 Populus deltoides WV94
Podel.04G088300 5.0kb downstream 5.0kb downstream 8231 true Chr04: 7818121-7826351 Populus deltoides WV94
Podel.04G088300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 7821352-7826351 Populus deltoides WV94
Podel.04G088300 10.0kb upstream 10.0kb upstream 13231 true Chr04: 7808121-7821351 Populus deltoides WV94
Podel.04G088300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 7808121-7818120 Populus deltoides WV94
Podel.04G088300 10.0kb downstream 10.0kb downstream 13231 true Chr04: 7818121-7831351 Populus deltoides WV94
Podel.04G088300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 7821352-7831351 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122463216 5262 Malpighiales View MSA
124251202 5268 Malvidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier