Gene : Podel.08G171900 P. deltoides WV94 v2.1
Defline:  (1 of 3) K00797 - spermidine synthase (speE, SRM) Genomic Order:  1719
Name:  ? Podel.08G171900 Secondary Identifier:  ? PAC:37305827
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 BSUBPOLYAMSYN-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 POLYAMINSYN3-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-7528 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.08G171900 0.5kb upstream 0.5kb upstream 4509 true Chr08: 12129092-12133600 Populus deltoides WV94
Podel.08G171900 0.5kb upstream 0.5kb upstream 500 false Chr08: 12129092-12129591 Populus deltoides WV94
Podel.08G171900 0.5kb downstream 0.5kb downstream 4509 true Chr08: 12129592-12134100 Populus deltoides WV94
Podel.08G171900 0.5kb downstream 0.5kb downstream 500 false Chr08: 12133601-12134100 Populus deltoides WV94
Podel.08G171900 1.0kb upstream 1.0kb upstream 5009 true Chr08: 12128592-12133600 Populus deltoides WV94
Podel.08G171900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 12128592-12129591 Populus deltoides WV94
Podel.08G171900 1.0kb downstream 1.0kb downstream 5009 true Chr08: 12129592-12134600 Populus deltoides WV94
Podel.08G171900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 12133601-12134600 Populus deltoides WV94
Podel.08G171900 2.0kb upstream 2.0kb upstream 6009 true Chr08: 12127592-12133600 Populus deltoides WV94
Podel.08G171900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 12127592-12129591 Populus deltoides WV94
Podel.08G171900 2.0kb downstream 2.0kb downstream 6009 true Chr08: 12129592-12135600 Populus deltoides WV94
Podel.08G171900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 12133601-12135600 Populus deltoides WV94
Podel.08G171900 5.0kb upstream 5.0kb upstream 9009 true Chr08: 12124592-12133600 Populus deltoides WV94
Podel.08G171900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 12124592-12129591 Populus deltoides WV94
Podel.08G171900 5.0kb downstream 5.0kb downstream 9009 true Chr08: 12129592-12138600 Populus deltoides WV94
Podel.08G171900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 12133601-12138600 Populus deltoides WV94
Podel.08G171900 10.0kb upstream 10.0kb upstream 14009 true Chr08: 12119592-12133600 Populus deltoides WV94
Podel.08G171900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 12119592-12129591 Populus deltoides WV94
Podel.08G171900 10.0kb downstream 10.0kb downstream 14009 true Chr08: 12129592-12143600 Populus deltoides WV94
Podel.08G171900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 12133601-12143600 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122427762 5262 Malpighiales View MSA
124246037 5268 Malvidae View MSA
124061949 5270 Rosid View MSA
123741827 5271 Pentapetalae View MSA
122790008 5272 Eudicot View MSA
122043696 5273 Angiosperm View MSA
121346443 5274 Embryophyte View MSA
123424303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier