Gene : Podel.14G002800 P. deltoides WV94 v2.1
Defline:  (1 of 1) PF13243 - Squalene-hopene cyclase C-terminal domain (SQHop_cyclase_C) Genomic Order:  28
Name:  ? Podel.14G002800 Secondary Identifier:  ? PAC:37292022
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-5203 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6109 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.14G002800 0.5kb upstream 0.5kb upstream 1726 true Chr14: 294966-296691 Populus deltoides WV94
Podel.14G002800 0.5kb upstream 0.5kb upstream 500 false Chr14: 294966-295465 Populus deltoides WV94
Podel.14G002800 0.5kb downstream 0.5kb downstream 1726 true Chr14: 295466-297191 Populus deltoides WV94
Podel.14G002800 0.5kb downstream 0.5kb downstream 500 false Chr14: 296692-297191 Populus deltoides WV94
Podel.14G002800 1.0kb upstream 1.0kb upstream 2226 true Chr14: 294466-296691 Populus deltoides WV94
Podel.14G002800 1.0kb upstream 1.0kb upstream 1000 false Chr14: 294466-295465 Populus deltoides WV94
Podel.14G002800 1.0kb downstream 1.0kb downstream 2226 true Chr14: 295466-297691 Populus deltoides WV94
Podel.14G002800 1.0kb downstream 1.0kb downstream 1000 false Chr14: 296692-297691 Populus deltoides WV94
Podel.14G002800 2.0kb upstream 2.0kb upstream 3226 true Chr14: 293466-296691 Populus deltoides WV94
Podel.14G002800 2.0kb upstream 2.0kb upstream 2000 false Chr14: 293466-295465 Populus deltoides WV94
Podel.14G002800 2.0kb downstream 2.0kb downstream 3226 true Chr14: 295466-298691 Populus deltoides WV94
Podel.14G002800 2.0kb downstream 2.0kb downstream 2000 false Chr14: 296692-298691 Populus deltoides WV94
Podel.14G002800 5.0kb upstream 5.0kb upstream 6226 true Chr14: 290466-296691 Populus deltoides WV94
Podel.14G002800 5.0kb upstream 5.0kb upstream 5000 false Chr14: 290466-295465 Populus deltoides WV94
Podel.14G002800 5.0kb downstream 5.0kb downstream 6226 true Chr14: 295466-301691 Populus deltoides WV94
Podel.14G002800 5.0kb downstream 5.0kb downstream 5000 false Chr14: 296692-301691 Populus deltoides WV94
Podel.14G002800 10.0kb upstream 10.0kb upstream 11226 true Chr14: 285466-296691 Populus deltoides WV94
Podel.14G002800 10.0kb upstream 10.0kb upstream 10000 false Chr14: 285466-295465 Populus deltoides WV94
Podel.14G002800 10.0kb downstream 10.0kb downstream 11226 true Chr14: 295466-306691 Populus deltoides WV94
Podel.14G002800 10.0kb downstream 10.0kb downstream 10000 false Chr14: 296692-306691 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028959 5273 Angiosperm View MSA
122388200 5262 Malpighiales Singleton cluster - no MSA
124186313 5268 Malvidae Singleton cluster - no MSA
124073512 5270 Rosid View MSA
123747088 5271 Pentapetalae View MSA
122797329 5272 Eudicot View MSA
121298379 5274 Embryophyte View MSA
123336355 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier