Gene : Podel.T028200 P. deltoides WV94 v2.1
Defline:  (1 of 2) PTHR22594:SF20 - LYSINE--TRNA LIGASE Genomic Order:  4
Name:  ? Podel.T028200 Secondary Identifier:  ? PAC:37303554
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 TRNA-CHARGING-PWY Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.T028200 0.5kb upstream 0.5kb upstream 6534 true scaffold_1301: 8807-15340 Populus deltoides WV94
Podel.T028200 0.5kb upstream 0.5kb upstream 500 false scaffold_1301: 14841-15340 Populus deltoides WV94
Podel.T028200 0.5kb downstream 0.5kb downstream 6534 true scaffold_1301: 8307-14840 Populus deltoides WV94
Podel.T028200 0.5kb downstream 0.5kb downstream 500 false scaffold_1301: 8307-8806 Populus deltoides WV94
Podel.T028200 1.0kb upstream 1.0kb upstream 6763 true scaffold_1301: 8807-15569 Populus deltoides WV94
Podel.T028200 1.0kb upstream 1.0kb upstream 729 false scaffold_1301: 14841-15569 Populus deltoides WV94
Podel.T028200 1.0kb downstream 1.0kb downstream 7034 true scaffold_1301: 7807-14840 Populus deltoides WV94
Podel.T028200 1.0kb downstream 1.0kb downstream 1000 false scaffold_1301: 7807-8806 Populus deltoides WV94
Podel.T028200 2.0kb upstream 2.0kb upstream 6763 true scaffold_1301: 8807-15569 Populus deltoides WV94
Podel.T028200 2.0kb upstream 2.0kb upstream 729 false scaffold_1301: 14841-15569 Populus deltoides WV94
Podel.T028200 2.0kb downstream 2.0kb downstream 8034 true scaffold_1301: 6807-14840 Populus deltoides WV94
Podel.T028200 2.0kb downstream 2.0kb downstream 2000 false scaffold_1301: 6807-8806 Populus deltoides WV94
Podel.T028200 5.0kb upstream 5.0kb upstream 6763 true scaffold_1301: 8807-15569 Populus deltoides WV94
Podel.T028200 5.0kb upstream 5.0kb upstream 729 false scaffold_1301: 14841-15569 Populus deltoides WV94
Podel.T028200 5.0kb downstream 5.0kb downstream 11034 true scaffold_1301: 3807-14840 Populus deltoides WV94
Podel.T028200 5.0kb downstream 5.0kb downstream 5000 false scaffold_1301: 3807-8806 Populus deltoides WV94
Podel.T028200 10.0kb upstream 10.0kb upstream 6763 true scaffold_1301: 8807-15569 Populus deltoides WV94
Podel.T028200 10.0kb upstream 10.0kb upstream 729 false scaffold_1301: 14841-15569 Populus deltoides WV94
Podel.T028200 10.0kb downstream 10.0kb downstream 14840 true scaffold_1301: 1-14840 Populus deltoides WV94
Podel.T028200 10.0kb downstream 10.0kb downstream 8806 false scaffold_1301: 1-8806 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458438 5262 Malpighiales View MSA
124239048 5268 Malvidae View MSA
124063653 5270 Rosid View MSA
123739204 5271 Pentapetalae View MSA
122788489 5272 Eudicot View MSA
122044302 5273 Angiosperm View MSA
121346599 5274 Embryophyte View MSA
123423817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier