Gene : Podel.T049900 P. deltoides WV94 v2.1
Defline:  (1 of 13) K04506 - E3 ubiquitin-protein ligase SIAH1 (SIAH1) Genomic Order:  1
Name:  ? Podel.T049900 Secondary Identifier:  ? PAC:37283618
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-7511 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.T049900 0.5kb upstream 0.5kb upstream 4228 true scaffold_1709: 414-4641 Populus deltoides WV94
Podel.T049900 0.5kb upstream 0.5kb upstream 500 false scaffold_1709: 414-913 Populus deltoides WV94
Podel.T049900 0.5kb downstream 0.5kb downstream 4228 true scaffold_1709: 914-5141 Populus deltoides WV94
Podel.T049900 0.5kb downstream 0.5kb downstream 500 false scaffold_1709: 4642-5141 Populus deltoides WV94
Podel.T049900 1.0kb upstream 1.0kb upstream 4641 true scaffold_1709: 1-4641 Populus deltoides WV94
Podel.T049900 1.0kb upstream 1.0kb upstream 913 false scaffold_1709: 1-913 Populus deltoides WV94
Podel.T049900 1.0kb downstream 1.0kb downstream 4728 true scaffold_1709: 914-5641 Populus deltoides WV94
Podel.T049900 1.0kb downstream 1.0kb downstream 1000 false scaffold_1709: 4642-5641 Populus deltoides WV94
Podel.T049900 2.0kb upstream 2.0kb upstream 4641 true scaffold_1709: 1-4641 Populus deltoides WV94
Podel.T049900 2.0kb upstream 2.0kb upstream 913 false scaffold_1709: 1-913 Populus deltoides WV94
Podel.T049900 2.0kb downstream 2.0kb downstream 5728 true scaffold_1709: 914-6641 Populus deltoides WV94
Podel.T049900 2.0kb downstream 2.0kb downstream 2000 false scaffold_1709: 4642-6641 Populus deltoides WV94
Podel.T049900 5.0kb upstream 5.0kb upstream 4641 true scaffold_1709: 1-4641 Populus deltoides WV94
Podel.T049900 5.0kb upstream 5.0kb upstream 913 false scaffold_1709: 1-913 Populus deltoides WV94
Podel.T049900 5.0kb downstream 5.0kb downstream 7806 true scaffold_1709: 914-8719 Populus deltoides WV94
Podel.T049900 5.0kb downstream 5.0kb downstream 4078 false scaffold_1709: 4642-8719 Populus deltoides WV94
Podel.T049900 10.0kb upstream 10.0kb upstream 4641 true scaffold_1709: 1-4641 Populus deltoides WV94
Podel.T049900 10.0kb upstream 10.0kb upstream 913 false scaffold_1709: 1-913 Populus deltoides WV94
Podel.T049900 10.0kb downstream 10.0kb downstream 7806 true scaffold_1709: 914-8719 Populus deltoides WV94
Podel.T049900 10.0kb downstream 10.0kb downstream 4078 false scaffold_1709: 4642-8719 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425893 5262 Malpighiales View MSA
124251160 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier