Gene : Podel.T129800 P. deltoides WV94 v2.1

Defline:  (1 of 5) PTHR31517:SF11 - PEROXIDASE 31-RELATED Genomic Order:  2
Name:  ? Podel.T129800 Secondary Identifier:  ? PAC:37315975

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-5466 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6824 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-7214 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-7445 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.T129800 0.5kb upstream 0.5kb upstream 1878 true scaffold_318: 23323-25200 Populus deltoides WV94
Podel.T129800 0.5kb upstream 0.5kb upstream 500 false scaffold_318: 23323-23822 Populus deltoides WV94
Podel.T129800 0.5kb downstream 0.5kb downstream 1878 true scaffold_318: 23823-25700 Populus deltoides WV94
Podel.T129800 0.5kb downstream 0.5kb downstream 500 false scaffold_318: 25201-25700 Populus deltoides WV94
Podel.T129800 1.0kb upstream 1.0kb upstream 2378 true scaffold_318: 22823-25200 Populus deltoides WV94
Podel.T129800 1.0kb upstream 1.0kb upstream 1000 false scaffold_318: 22823-23822 Populus deltoides WV94
Podel.T129800 1.0kb downstream 1.0kb downstream 2378 true scaffold_318: 23823-26200 Populus deltoides WV94
Podel.T129800 1.0kb downstream 1.0kb downstream 1000 false scaffold_318: 25201-26200 Populus deltoides WV94
Podel.T129800 2.0kb upstream 2.0kb upstream 3378 true scaffold_318: 21823-25200 Populus deltoides WV94
Podel.T129800 2.0kb upstream 2.0kb upstream 2000 false scaffold_318: 21823-23822 Populus deltoides WV94
Podel.T129800 2.0kb downstream 2.0kb downstream 3378 true scaffold_318: 23823-27200 Populus deltoides WV94
Podel.T129800 2.0kb downstream 2.0kb downstream 2000 false scaffold_318: 25201-27200 Populus deltoides WV94
Podel.T129800 5.0kb upstream 5.0kb upstream 6378 true scaffold_318: 18823-25200 Populus deltoides WV94
Podel.T129800 5.0kb upstream 5.0kb upstream 5000 false scaffold_318: 18823-23822 Populus deltoides WV94
Podel.T129800 5.0kb downstream 5.0kb downstream 6378 true scaffold_318: 23823-30200 Populus deltoides WV94
Podel.T129800 5.0kb downstream 5.0kb downstream 5000 false scaffold_318: 25201-30200 Populus deltoides WV94
Podel.T129800 10.0kb upstream 10.0kb upstream 11378 true scaffold_318: 13823-25200 Populus deltoides WV94
Podel.T129800 10.0kb upstream 10.0kb upstream 10000 false scaffold_318: 13823-23822 Populus deltoides WV94
Podel.T129800 10.0kb downstream 10.0kb downstream 11378 true scaffold_318: 23823-35200 Populus deltoides WV94
Podel.T129800 10.0kb downstream 10.0kb downstream 10000 false scaffold_318: 25201-35200 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454333 5262 Malpighiales View MSA
124240815 5268 Malvidae View MSA
124069813 5270 Rosid View MSA
123741716 5271 Pentapetalae View MSA
122795989 5272 Eudicot View MSA
122048017 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier