Gene : Podel.T238600 P. deltoides WV94 v2.1
Defline:  (1 of 7) 6.1.1.10 - Methionine--tRNA ligase / MetRS Genomic Order:  1
Name:  ? Podel.T238600 Secondary Identifier:  ? PAC:37283113
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 TRNA-CHARGING-PWY Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.T238600 0.5kb upstream 0.5kb upstream 7197 true scaffold_683: 9626-16822 Populus deltoides WV94
Podel.T238600 0.5kb upstream 0.5kb upstream 500 false scaffold_683: 9626-10125 Populus deltoides WV94
Podel.T238600 0.5kb downstream 0.5kb downstream 7197 true scaffold_683: 10126-17322 Populus deltoides WV94
Podel.T238600 0.5kb downstream 0.5kb downstream 500 false scaffold_683: 16823-17322 Populus deltoides WV94
Podel.T238600 1.0kb upstream 1.0kb upstream 7697 true scaffold_683: 9126-16822 Populus deltoides WV94
Podel.T238600 1.0kb upstream 1.0kb upstream 1000 false scaffold_683: 9126-10125 Populus deltoides WV94
Podel.T238600 1.0kb downstream 1.0kb downstream 7697 true scaffold_683: 10126-17822 Populus deltoides WV94
Podel.T238600 1.0kb downstream 1.0kb downstream 1000 false scaffold_683: 16823-17822 Populus deltoides WV94
Podel.T238600 2.0kb upstream 2.0kb upstream 8697 true scaffold_683: 8126-16822 Populus deltoides WV94
Podel.T238600 2.0kb upstream 2.0kb upstream 2000 false scaffold_683: 8126-10125 Populus deltoides WV94
Podel.T238600 2.0kb downstream 2.0kb downstream 8697 true scaffold_683: 10126-18822 Populus deltoides WV94
Podel.T238600 2.0kb downstream 2.0kb downstream 2000 false scaffold_683: 16823-18822 Populus deltoides WV94
Podel.T238600 5.0kb upstream 5.0kb upstream 11697 true scaffold_683: 5126-16822 Populus deltoides WV94
Podel.T238600 5.0kb upstream 5.0kb upstream 5000 false scaffold_683: 5126-10125 Populus deltoides WV94
Podel.T238600 5.0kb downstream 5.0kb downstream 11697 true scaffold_683: 10126-21822 Populus deltoides WV94
Podel.T238600 5.0kb downstream 5.0kb downstream 5000 false scaffold_683: 16823-21822 Populus deltoides WV94
Podel.T238600 10.0kb upstream 10.0kb upstream 16697 true scaffold_683: 126-16822 Populus deltoides WV94
Podel.T238600 10.0kb upstream 10.0kb upstream 10000 false scaffold_683: 126-10125 Populus deltoides WV94
Podel.T238600 10.0kb downstream 10.0kb downstream 16697 true scaffold_683: 10126-26822 Populus deltoides WV94
Podel.T238600 10.0kb downstream 10.0kb downstream 10000 false scaffold_683: 16823-26822 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122456866 5262 Malpighiales View MSA
124237749 5268 Malvidae View MSA
124063262 5270 Rosid View MSA
123740350 5271 Pentapetalae View MSA
122787501 5272 Eudicot View MSA
122043552 5273 Angiosperm View MSA
121350669 5274 Embryophyte View MSA
123427531 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier