Gene : Podel.05G138100 P. deltoides WV94 v2.1

Defline:  (1 of 2) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Genomic Order:  1381
Name:  ? Podel.05G138100 Secondary Identifier:  ? PAC:37318136

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-3781 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-4302 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5464 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-561 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5690 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-7279 Populus deltoides WV94 pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.05G138100 0.5kb upstream 0.5kb upstream 7603 true Chr05: 10438934-10446536 Populus deltoides WV94
Podel.05G138100 0.5kb upstream 0.5kb upstream 500 false Chr05: 10446037-10446536 Populus deltoides WV94
Podel.05G138100 0.5kb downstream 0.5kb downstream 7603 true Chr05: 10438434-10446036 Populus deltoides WV94
Podel.05G138100 0.5kb downstream 0.5kb downstream 500 false Chr05: 10438434-10438933 Populus deltoides WV94
Podel.05G138100 1.0kb upstream 1.0kb upstream 8103 true Chr05: 10438934-10447036 Populus deltoides WV94
Podel.05G138100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 10446037-10447036 Populus deltoides WV94
Podel.05G138100 1.0kb downstream 1.0kb downstream 8103 true Chr05: 10437934-10446036 Populus deltoides WV94
Podel.05G138100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 10437934-10438933 Populus deltoides WV94
Podel.05G138100 2.0kb upstream 2.0kb upstream 9103 true Chr05: 10438934-10448036 Populus deltoides WV94
Podel.05G138100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 10446037-10448036 Populus deltoides WV94
Podel.05G138100 2.0kb downstream 2.0kb downstream 9103 true Chr05: 10436934-10446036 Populus deltoides WV94
Podel.05G138100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 10436934-10438933 Populus deltoides WV94
Podel.05G138100 5.0kb upstream 5.0kb upstream 12103 true Chr05: 10438934-10451036 Populus deltoides WV94
Podel.05G138100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 10446037-10451036 Populus deltoides WV94
Podel.05G138100 5.0kb downstream 5.0kb downstream 12103 true Chr05: 10433934-10446036 Populus deltoides WV94
Podel.05G138100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 10433934-10438933 Populus deltoides WV94
Podel.05G138100 10.0kb upstream 10.0kb upstream 17103 true Chr05: 10438934-10456036 Populus deltoides WV94
Podel.05G138100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 10446037-10456036 Populus deltoides WV94
Podel.05G138100 10.0kb downstream 10.0kb downstream 17103 true Chr05: 10428934-10446036 Populus deltoides WV94
Podel.05G138100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 10428934-10438933 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452650 5262 Malpighiales View MSA
124254053 5268 Malvidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier