Gene : Podel.05G064800 P. deltoides WV94 v2.1

Defline:  (1 of 6) PTHR11177//PTHR11177:SF187 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  648
Name:  ? Podel.05G064800 Secondary Identifier:  ? PAC:37319159

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-6902 Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.05G064800 0.5kb upstream 0.5kb upstream 1304 true Chr05: 4341483-4342786 Populus deltoides WV94
Podel.05G064800 0.5kb upstream 0.5kb upstream 500 false Chr05: 4341483-4341982 Populus deltoides WV94
Podel.05G064800 0.5kb downstream 0.5kb downstream 1304 true Chr05: 4341983-4343286 Populus deltoides WV94
Podel.05G064800 0.5kb downstream 0.5kb downstream 500 false Chr05: 4342787-4343286 Populus deltoides WV94
Podel.05G064800 1.0kb upstream 1.0kb upstream 1804 true Chr05: 4340983-4342786 Populus deltoides WV94
Podel.05G064800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 4340983-4341982 Populus deltoides WV94
Podel.05G064800 1.0kb downstream 1.0kb downstream 1804 true Chr05: 4341983-4343786 Populus deltoides WV94
Podel.05G064800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 4342787-4343786 Populus deltoides WV94
Podel.05G064800 2.0kb upstream 2.0kb upstream 2804 true Chr05: 4339983-4342786 Populus deltoides WV94
Podel.05G064800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 4339983-4341982 Populus deltoides WV94
Podel.05G064800 2.0kb downstream 2.0kb downstream 2804 true Chr05: 4341983-4344786 Populus deltoides WV94
Podel.05G064800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 4342787-4344786 Populus deltoides WV94
Podel.05G064800 5.0kb upstream 5.0kb upstream 5804 true Chr05: 4336983-4342786 Populus deltoides WV94
Podel.05G064800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 4336983-4341982 Populus deltoides WV94
Podel.05G064800 5.0kb downstream 5.0kb downstream 5804 true Chr05: 4341983-4347786 Populus deltoides WV94
Podel.05G064800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 4342787-4347786 Populus deltoides WV94
Podel.05G064800 10.0kb upstream 10.0kb upstream 10804 true Chr05: 4331983-4342786 Populus deltoides WV94
Podel.05G064800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 4331983-4341982 Populus deltoides WV94
Podel.05G064800 10.0kb downstream 10.0kb downstream 10804 true Chr05: 4341983-4352786 Populus deltoides WV94
Podel.05G064800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 4342787-4352786 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122384713 5262 Malpighiales Singleton cluster - no MSA
124183288 5268 Malvidae Singleton cluster - no MSA
124051168 5270 Rosid View MSA
123757988 5271 Pentapetalae View MSA
122778989 5272 Eudicot View MSA
122051321 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier