Gene : Podel.01G417400 P. deltoides WV94 v2.1
Defline:  (1 of 2) PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Genomic Order:  4174
Name:  ? Podel.01G417400 Secondary Identifier:  ? PAC:37311619
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PWY-695 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.01G417400 0.5kb upstream 0.5kb upstream 2852 true Chr01: 44712764-44715615 Populus deltoides WV94
Podel.01G417400 0.5kb upstream 0.5kb upstream 500 false Chr01: 44712764-44713263 Populus deltoides WV94
Podel.01G417400 0.5kb downstream 0.5kb downstream 2852 true Chr01: 44713264-44716115 Populus deltoides WV94
Podel.01G417400 0.5kb downstream 0.5kb downstream 500 false Chr01: 44715616-44716115 Populus deltoides WV94
Podel.01G417400 1.0kb upstream 1.0kb upstream 3352 true Chr01: 44712264-44715615 Populus deltoides WV94
Podel.01G417400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 44712264-44713263 Populus deltoides WV94
Podel.01G417400 1.0kb downstream 1.0kb downstream 3352 true Chr01: 44713264-44716615 Populus deltoides WV94
Podel.01G417400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 44715616-44716615 Populus deltoides WV94
Podel.01G417400 2.0kb upstream 2.0kb upstream 4352 true Chr01: 44711264-44715615 Populus deltoides WV94
Podel.01G417400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 44711264-44713263 Populus deltoides WV94
Podel.01G417400 2.0kb downstream 2.0kb downstream 4352 true Chr01: 44713264-44717615 Populus deltoides WV94
Podel.01G417400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 44715616-44717615 Populus deltoides WV94
Podel.01G417400 5.0kb upstream 5.0kb upstream 7352 true Chr01: 44708264-44715615 Populus deltoides WV94
Podel.01G417400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 44708264-44713263 Populus deltoides WV94
Podel.01G417400 5.0kb downstream 5.0kb downstream 7352 true Chr01: 44713264-44720615 Populus deltoides WV94
Podel.01G417400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 44715616-44720615 Populus deltoides WV94
Podel.01G417400 10.0kb upstream 10.0kb upstream 12352 true Chr01: 44703264-44715615 Populus deltoides WV94
Podel.01G417400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 44703264-44713263 Populus deltoides WV94
Podel.01G417400 10.0kb downstream 10.0kb downstream 12352 true Chr01: 44713264-44725615 Populus deltoides WV94
Podel.01G417400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 44715616-44725615 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461041 5262 Malpighiales View MSA
124250838 5268 Malvidae View MSA
124068526 5270 Rosid View MSA
123741505 5271 Pentapetalae View MSA
122796781 5272 Eudicot View MSA
122050852 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier