Gene : Podel.10G173100 P. deltoides WV94 v2.1

Defline:  (1 of 2) PTHR11406:SF8 - PHOSPHOGLYCERATE KINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1731
Name:  ? Podel.10G173100 Secondary Identifier:  ? PAC:37339577

Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 ANAEROFRUCAT-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 ANAGLYCOLYSIS-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 CALVIN-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 GLUCONEO-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PHOTOALL-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-1042 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-5464 Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY66-399 Populus deltoides WV94 pathologic  
PdeltoidesWV94 SUCSYN-PWY Populus deltoides WV94 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.10G173100 0.5kb upstream 0.5kb upstream 4469 true Chr10: 16194359-16198827 Populus deltoides WV94
Podel.10G173100 0.5kb upstream 0.5kb upstream 500 false Chr10: 16194359-16194858 Populus deltoides WV94
Podel.10G173100 0.5kb downstream 0.5kb downstream 4469 true Chr10: 16194859-16199327 Populus deltoides WV94
Podel.10G173100 0.5kb downstream 0.5kb downstream 500 false Chr10: 16198828-16199327 Populus deltoides WV94
Podel.10G173100 1.0kb upstream 1.0kb upstream 4969 true Chr10: 16193859-16198827 Populus deltoides WV94
Podel.10G173100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 16193859-16194858 Populus deltoides WV94
Podel.10G173100 1.0kb downstream 1.0kb downstream 4969 true Chr10: 16194859-16199827 Populus deltoides WV94
Podel.10G173100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 16198828-16199827 Populus deltoides WV94
Podel.10G173100 2.0kb upstream 2.0kb upstream 5969 true Chr10: 16192859-16198827 Populus deltoides WV94
Podel.10G173100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 16192859-16194858 Populus deltoides WV94
Podel.10G173100 2.0kb downstream 2.0kb downstream 5969 true Chr10: 16194859-16200827 Populus deltoides WV94
Podel.10G173100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 16198828-16200827 Populus deltoides WV94
Podel.10G173100 5.0kb upstream 5.0kb upstream 8969 true Chr10: 16189859-16198827 Populus deltoides WV94
Podel.10G173100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 16189859-16194858 Populus deltoides WV94
Podel.10G173100 5.0kb downstream 5.0kb downstream 8969 true Chr10: 16194859-16203827 Populus deltoides WV94
Podel.10G173100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 16198828-16203827 Populus deltoides WV94
Podel.10G173100 10.0kb upstream 10.0kb upstream 13969 true Chr10: 16184859-16198827 Populus deltoides WV94
Podel.10G173100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 16184859-16194858 Populus deltoides WV94
Podel.10G173100 10.0kb downstream 10.0kb downstream 13969 true Chr10: 16194859-16208827 Populus deltoides WV94
Podel.10G173100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 16198828-16208827 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454081 5262 Malpighiales View MSA
124238345 5268 Malvidae View MSA
124066937 5270 Rosid View MSA
123738509 5271 Pentapetalae View MSA
122793227 5272 Eudicot View MSA
122042825 5273 Angiosperm View MSA
121348563 5274 Embryophyte View MSA
123423936 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier