Gene : Podel.13G173800 P. deltoides WV94 v2.1
Defline:  (1 of 3) K02706 - photosystem II P680 reaction center D2 protein (psbD) Genomic Order:  1738
Name:  ? Podel.13G173800 Secondary Identifier:  ? PAC:37335286
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 PHOTOALL-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-101 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.13G173800 0.5kb upstream 0.5kb upstream 1432 true Chr13: 15745953-15747384 Populus deltoides WV94
Podel.13G173800 0.5kb upstream 0.5kb upstream 500 false Chr13: 15746885-15747384 Populus deltoides WV94
Podel.13G173800 0.5kb downstream 0.5kb downstream 1432 true Chr13: 15745453-15746884 Populus deltoides WV94
Podel.13G173800 0.5kb downstream 0.5kb downstream 500 false Chr13: 15745453-15745952 Populus deltoides WV94
Podel.13G173800 1.0kb upstream 1.0kb upstream 1932 true Chr13: 15745953-15747884 Populus deltoides WV94
Podel.13G173800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 15746885-15747884 Populus deltoides WV94
Podel.13G173800 1.0kb downstream 1.0kb downstream 1932 true Chr13: 15744953-15746884 Populus deltoides WV94
Podel.13G173800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 15744953-15745952 Populus deltoides WV94
Podel.13G173800 2.0kb upstream 2.0kb upstream 2932 true Chr13: 15745953-15748884 Populus deltoides WV94
Podel.13G173800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 15746885-15748884 Populus deltoides WV94
Podel.13G173800 2.0kb downstream 2.0kb downstream 2932 true Chr13: 15743953-15746884 Populus deltoides WV94
Podel.13G173800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 15743953-15745952 Populus deltoides WV94
Podel.13G173800 5.0kb upstream 5.0kb upstream 5932 true Chr13: 15745953-15751884 Populus deltoides WV94
Podel.13G173800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 15746885-15751884 Populus deltoides WV94
Podel.13G173800 5.0kb downstream 5.0kb downstream 5932 true Chr13: 15740953-15746884 Populus deltoides WV94
Podel.13G173800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 15740953-15745952 Populus deltoides WV94
Podel.13G173800 10.0kb upstream 10.0kb upstream 10932 true Chr13: 15745953-15756884 Populus deltoides WV94
Podel.13G173800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 15746885-15756884 Populus deltoides WV94
Podel.13G173800 10.0kb downstream 10.0kb downstream 10932 true Chr13: 15735953-15746884 Populus deltoides WV94
Podel.13G173800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 15735953-15745952 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122387765 5262 Malpighiales Singleton cluster - no MSA
124254176 5268 Malvidae View MSA
124074858 5270 Rosid View MSA
123753555 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier