Gene : Podel.16G070300 P. deltoides WV94 v2.1
Defline:  (1 of 1) K09835 - prolycopene isomerase (crtISO, crtH) Genomic Order:  703
Name:  ? Podel.16G070300 Secondary Identifier:  ? PAC:37301074
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PdeltoidesWV94 CAROTENOID-PWY Populus deltoides WV94 pathologic  
PdeltoidesWV94 PWY-6475 Populus deltoides WV94 pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Podel.16G070300 0.5kb upstream 0.5kb upstream 6936 true Chr16: 5011348-5018283 Populus deltoides WV94
Podel.16G070300 0.5kb upstream 0.5kb upstream 500 false Chr16: 5017784-5018283 Populus deltoides WV94
Podel.16G070300 0.5kb downstream 0.5kb downstream 6936 true Chr16: 5010848-5017783 Populus deltoides WV94
Podel.16G070300 0.5kb downstream 0.5kb downstream 500 false Chr16: 5010848-5011347 Populus deltoides WV94
Podel.16G070300 1.0kb upstream 1.0kb upstream 7436 true Chr16: 5011348-5018783 Populus deltoides WV94
Podel.16G070300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 5017784-5018783 Populus deltoides WV94
Podel.16G070300 1.0kb downstream 1.0kb downstream 7436 true Chr16: 5010348-5017783 Populus deltoides WV94
Podel.16G070300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 5010348-5011347 Populus deltoides WV94
Podel.16G070300 2.0kb upstream 2.0kb upstream 8436 true Chr16: 5011348-5019783 Populus deltoides WV94
Podel.16G070300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 5017784-5019783 Populus deltoides WV94
Podel.16G070300 2.0kb downstream 2.0kb downstream 8436 true Chr16: 5009348-5017783 Populus deltoides WV94
Podel.16G070300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 5009348-5011347 Populus deltoides WV94
Podel.16G070300 5.0kb upstream 5.0kb upstream 11436 true Chr16: 5011348-5022783 Populus deltoides WV94
Podel.16G070300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 5017784-5022783 Populus deltoides WV94
Podel.16G070300 5.0kb downstream 5.0kb downstream 11436 true Chr16: 5006348-5017783 Populus deltoides WV94
Podel.16G070300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 5006348-5011347 Populus deltoides WV94
Podel.16G070300 10.0kb upstream 10.0kb upstream 16436 true Chr16: 5011348-5027783 Populus deltoides WV94
Podel.16G070300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 5017784-5027783 Populus deltoides WV94
Podel.16G070300 10.0kb downstream 10.0kb downstream 16436 true Chr16: 5001348-5017783 Populus deltoides WV94
Podel.16G070300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 5001348-5011347 Populus deltoides WV94

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026345 5273 Angiosperm View MSA
122458621 5262 Malpighiales View MSA
124242220 5268 Malvidae View MSA
124064637 5270 Rosid View MSA
123738016 5271 Pentapetalae View MSA
122791420 5272 Eudicot View MSA
121345795 5274 Embryophyte View MSA
123425130 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier