Gene : PGSC0003DMG400008815 S. tuberosum v4.03
Defline:  (1 of 2) PTHR13871//PTHR13871:SF30 - THIOREDOXIN // CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN-RELATED Genomic Order:  138
Name:  ? PGSC0003DMG400008815 Secondary Identifier:  ? PAC:37454758
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-7039 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400008815 0.5kb upstream 0.5kb upstream 1807 true ST4.03ch09: 1341286-1343092 Solanum tuberosum
PGSC0003DMG400008815 0.5kb upstream 0.5kb upstream 500 false ST4.03ch09: 1341286-1341785 Solanum tuberosum
PGSC0003DMG400008815 0.5kb downstream 0.5kb downstream 1807 true ST4.03ch09: 1341786-1343592 Solanum tuberosum
PGSC0003DMG400008815 0.5kb downstream 0.5kb downstream 500 false ST4.03ch09: 1343093-1343592 Solanum tuberosum
PGSC0003DMG400008815 1.0kb upstream 1.0kb upstream 2307 true ST4.03ch09: 1340786-1343092 Solanum tuberosum
PGSC0003DMG400008815 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch09: 1340786-1341785 Solanum tuberosum
PGSC0003DMG400008815 1.0kb downstream 1.0kb downstream 2307 true ST4.03ch09: 1341786-1344092 Solanum tuberosum
PGSC0003DMG400008815 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch09: 1343093-1344092 Solanum tuberosum
PGSC0003DMG400008815 2.0kb upstream 2.0kb upstream 3307 true ST4.03ch09: 1339786-1343092 Solanum tuberosum
PGSC0003DMG400008815 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch09: 1339786-1341785 Solanum tuberosum
PGSC0003DMG400008815 2.0kb downstream 2.0kb downstream 3307 true ST4.03ch09: 1341786-1345092 Solanum tuberosum
PGSC0003DMG400008815 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch09: 1343093-1345092 Solanum tuberosum
PGSC0003DMG400008815 5.0kb upstream 5.0kb upstream 6307 true ST4.03ch09: 1336786-1343092 Solanum tuberosum
PGSC0003DMG400008815 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch09: 1336786-1341785 Solanum tuberosum
PGSC0003DMG400008815 5.0kb downstream 5.0kb downstream 6307 true ST4.03ch09: 1341786-1348092 Solanum tuberosum
PGSC0003DMG400008815 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch09: 1343093-1348092 Solanum tuberosum
PGSC0003DMG400008815 10.0kb upstream 10.0kb upstream 11307 true ST4.03ch09: 1331786-1343092 Solanum tuberosum
PGSC0003DMG400008815 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch09: 1331786-1341785 Solanum tuberosum
PGSC0003DMG400008815 10.0kb downstream 10.0kb downstream 11307 true ST4.03ch09: 1341786-1353092 Solanum tuberosum
PGSC0003DMG400008815 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch09: 1343093-1353092 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479767 5263 Asterids View MSA
123750493 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain