Gene : PGSC0003DMG400031809 S. tuberosum v4.03
Defline:  (1 of 2) PTHR11771//PTHR11771:SF53 - LIPOXYGENASE // LINOLEATE 9S-LIPOXYGENASE 5, CHLOROPLASTIC Genomic Order:  2327
Name:  ? PGSC0003DMG400031809 Secondary Identifier:  ? PAC:37458139
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-5406 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400031809 0.5kb upstream 0.5kb upstream 4721 true ST4.03ch09: 53384295-53389015 Solanum tuberosum
PGSC0003DMG400031809 0.5kb upstream 0.5kb upstream 500 false ST4.03ch09: 53384295-53384794 Solanum tuberosum
PGSC0003DMG400031809 0.5kb downstream 0.5kb downstream 4721 true ST4.03ch09: 53384795-53389515 Solanum tuberosum
PGSC0003DMG400031809 0.5kb downstream 0.5kb downstream 500 false ST4.03ch09: 53389016-53389515 Solanum tuberosum
PGSC0003DMG400031809 1.0kb upstream 1.0kb upstream 5221 true ST4.03ch09: 53383795-53389015 Solanum tuberosum
PGSC0003DMG400031809 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch09: 53383795-53384794 Solanum tuberosum
PGSC0003DMG400031809 1.0kb downstream 1.0kb downstream 5221 true ST4.03ch09: 53384795-53390015 Solanum tuberosum
PGSC0003DMG400031809 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch09: 53389016-53390015 Solanum tuberosum
PGSC0003DMG400031809 2.0kb upstream 2.0kb upstream 6221 true ST4.03ch09: 53382795-53389015 Solanum tuberosum
PGSC0003DMG400031809 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch09: 53382795-53384794 Solanum tuberosum
PGSC0003DMG400031809 2.0kb downstream 2.0kb downstream 6221 true ST4.03ch09: 53384795-53391015 Solanum tuberosum
PGSC0003DMG400031809 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch09: 53389016-53391015 Solanum tuberosum
PGSC0003DMG400031809 5.0kb upstream 5.0kb upstream 9221 true ST4.03ch09: 53379795-53389015 Solanum tuberosum
PGSC0003DMG400031809 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch09: 53379795-53384794 Solanum tuberosum
PGSC0003DMG400031809 5.0kb downstream 5.0kb downstream 9221 true ST4.03ch09: 53384795-53394015 Solanum tuberosum
PGSC0003DMG400031809 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch09: 53389016-53394015 Solanum tuberosum
PGSC0003DMG400031809 10.0kb upstream 10.0kb upstream 14221 true ST4.03ch09: 53374795-53389015 Solanum tuberosum
PGSC0003DMG400031809 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch09: 53374795-53384794 Solanum tuberosum
PGSC0003DMG400031809 10.0kb downstream 10.0kb downstream 14221 true ST4.03ch09: 53384795-53399015 Solanum tuberosum
PGSC0003DMG400031809 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch09: 53389016-53399015 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
121473028 5263 Asterids View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain