Protein : PGSC0003DMP400049011 S. tuberosum v4.03

Secondary Identifier:  PAC:37480163 Organism Name:  Solanum tuberosum
Length:  1642   Name:  PGSC0003DMP400049011
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Proteins

14 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR012337 Domain Ribonuclease H-like domain
IPR003029 Domain S1 domain
IPR027999 Domain Death-like domain of Spt6
IPR017072 Family Transcription elongation factor Spt6
IPR028231 Domain Transcription elongation factor Spt6, YqgF domain
IPR028088 Domain Helix-turn-helix DNA-binding domain of Spt6
IPR000980 Domain SH2 domain
IPR010994 Domain RuvA domain 2-like
IPR022967 Domain RNA-binding domain, S1
IPR023319 Domain Tex-like protein, HTH domain
IPR028083 Domain Spt6 acidic, N-terminal domain
IPR023097 Domain Tex RuvX-like domain
IPR023323 Domain Tex-like domain
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
PGSC0003DMT400072480_CDS 4929   ST4.03ch10: 56885441-56894884 Solanum tuberosum

42 Ontology Annotations

Ontology Term Db Gene/Protein Name
G3DSA:1.10.3500.10 GENE3D PGSC0003DMP400049011
G3DSA:2.40.50.140 GENE3D PGSC0003DMP400049011
G3DSA:1.10.10.650 GENE3D PGSC0003DMP400049011
G3DSA:1.10.150.310 GENE3D PGSC0003DMP400049011
3.2.1.8 ENZYME PGSC0003DMP400049011
IPR023323 InterPro PGSC0003DMP400049011
IPR027999 InterPro PGSC0003DMP400049011
IPR023097 InterPro PGSC0003DMP400049011
IPR023319 InterPro PGSC0003DMP400049011
IPR017072 InterPro PGSC0003DMP400049011
IPR022967 InterPro PGSC0003DMP400049011
IPR012337 InterPro PGSC0003DMP400049011
IPR012340 InterPro PGSC0003DMP400049011
IPR003029 InterPro PGSC0003DMP400049011
IPR010994 InterPro PGSC0003DMP400049011
GO:0032784 GO PGSC0003DMP400049011
IPR000980 InterPro PGSC0003DMP400049011
GO:0003677 GO PGSC0003DMP400049011
GO:0006357 GO PGSC0003DMP400049011
G3DSA:3.30.505.10 GENE3D PGSC0003DMP400049011
GO:0003676 GO PGSC0003DMP400049011
PS50126 PROFILE PGSC0003DMP400049011
SM00316 SMART PGSC0003DMP400049011
PF14878 PFAM PGSC0003DMP400049011
PIRSF036947 PIRSF PGSC0003DMP400049011
PF14639 PFAM PGSC0003DMP400049011
PF14641 PFAM PGSC0003DMP400049011
PF14633 PFAM PGSC0003DMP400049011
PF14635 PFAM PGSC0003DMP400049011
PTHR10145:SF6 PANTHER PGSC0003DMP400049011

0 Pathway Components

0 Pathways