Gene : PGSC0003DMG401014396 S. tuberosum v4.03
Defline:  (1 of 3) K01696 - tryptophan synthase beta chain (trpB) Genomic Order:  140
Name:  ? PGSC0003DMG401014396 Secondary Identifier:  ? PAC:37479159
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-6949 Solanum tuberosum pathologic  
Stuberosum TRPSYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG401014396 0.5kb upstream 0.5kb upstream 4476 true ST4.03ch10: 1314672-1319147 Solanum tuberosum
PGSC0003DMG401014396 0.5kb upstream 0.5kb upstream 500 false ST4.03ch10: 1314672-1315171 Solanum tuberosum
PGSC0003DMG401014396 0.5kb downstream 0.5kb downstream 4476 true ST4.03ch10: 1315172-1319647 Solanum tuberosum
PGSC0003DMG401014396 0.5kb downstream 0.5kb downstream 500 false ST4.03ch10: 1319148-1319647 Solanum tuberosum
PGSC0003DMG401014396 1.0kb upstream 1.0kb upstream 4976 true ST4.03ch10: 1314172-1319147 Solanum tuberosum
PGSC0003DMG401014396 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch10: 1314172-1315171 Solanum tuberosum
PGSC0003DMG401014396 1.0kb downstream 1.0kb downstream 4976 true ST4.03ch10: 1315172-1320147 Solanum tuberosum
PGSC0003DMG401014396 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch10: 1319148-1320147 Solanum tuberosum
PGSC0003DMG401014396 2.0kb upstream 2.0kb upstream 5976 true ST4.03ch10: 1313172-1319147 Solanum tuberosum
PGSC0003DMG401014396 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch10: 1313172-1315171 Solanum tuberosum
PGSC0003DMG401014396 2.0kb downstream 2.0kb downstream 5976 true ST4.03ch10: 1315172-1321147 Solanum tuberosum
PGSC0003DMG401014396 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch10: 1319148-1321147 Solanum tuberosum
PGSC0003DMG401014396 5.0kb upstream 5.0kb upstream 8976 true ST4.03ch10: 1310172-1319147 Solanum tuberosum
PGSC0003DMG401014396 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch10: 1310172-1315171 Solanum tuberosum
PGSC0003DMG401014396 5.0kb downstream 5.0kb downstream 8976 true ST4.03ch10: 1315172-1324147 Solanum tuberosum
PGSC0003DMG401014396 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch10: 1319148-1324147 Solanum tuberosum
PGSC0003DMG401014396 10.0kb upstream 10.0kb upstream 13976 true ST4.03ch10: 1305172-1319147 Solanum tuberosum
PGSC0003DMG401014396 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch10: 1305172-1315171 Solanum tuberosum
PGSC0003DMG401014396 10.0kb downstream 10.0kb downstream 13976 true ST4.03ch10: 1315172-1329147 Solanum tuberosum
PGSC0003DMG401014396 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch10: 1319148-1329147 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472061 5263 Asterids View MSA
123745831 5271 Pentapetalae View MSA
122787401 5272 Eudicot View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain