Gene : PGSC0003DMG400013102 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11946//PTHR11946:SF51 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // LEUCINE--TRNA LIGASE, CYTOPLASMIC Genomic Order:  863
Name:  ? PGSC0003DMG400013102 Secondary Identifier:  ? PAC:37426507
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum TRNA-CHARGING-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400013102 0.5kb upstream 0.5kb upstream 3740 true ST4.03ch02: 24183908-24187647 Solanum tuberosum
PGSC0003DMG400013102 0.5kb upstream 0.5kb upstream 500 false ST4.03ch02: 24183908-24184407 Solanum tuberosum
PGSC0003DMG400013102 0.5kb downstream 0.5kb downstream 3740 true ST4.03ch02: 24184408-24188147 Solanum tuberosum
PGSC0003DMG400013102 0.5kb downstream 0.5kb downstream 500 false ST4.03ch02: 24187648-24188147 Solanum tuberosum
PGSC0003DMG400013102 1.0kb upstream 1.0kb upstream 4240 true ST4.03ch02: 24183408-24187647 Solanum tuberosum
PGSC0003DMG400013102 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch02: 24183408-24184407 Solanum tuberosum
PGSC0003DMG400013102 1.0kb downstream 1.0kb downstream 4240 true ST4.03ch02: 24184408-24188647 Solanum tuberosum
PGSC0003DMG400013102 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch02: 24187648-24188647 Solanum tuberosum
PGSC0003DMG400013102 2.0kb upstream 2.0kb upstream 5240 true ST4.03ch02: 24182408-24187647 Solanum tuberosum
PGSC0003DMG400013102 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch02: 24182408-24184407 Solanum tuberosum
PGSC0003DMG400013102 2.0kb downstream 2.0kb downstream 5240 true ST4.03ch02: 24184408-24189647 Solanum tuberosum
PGSC0003DMG400013102 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch02: 24187648-24189647 Solanum tuberosum
PGSC0003DMG400013102 5.0kb upstream 5.0kb upstream 8240 true ST4.03ch02: 24179408-24187647 Solanum tuberosum
PGSC0003DMG400013102 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch02: 24179408-24184407 Solanum tuberosum
PGSC0003DMG400013102 5.0kb downstream 5.0kb downstream 8240 true ST4.03ch02: 24184408-24192647 Solanum tuberosum
PGSC0003DMG400013102 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch02: 24187648-24192647 Solanum tuberosum
PGSC0003DMG400013102 10.0kb upstream 10.0kb upstream 13240 true ST4.03ch02: 24174408-24187647 Solanum tuberosum
PGSC0003DMG400013102 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch02: 24174408-24184407 Solanum tuberosum
PGSC0003DMG400013102 10.0kb downstream 10.0kb downstream 13240 true ST4.03ch02: 24184408-24197647 Solanum tuberosum
PGSC0003DMG400013102 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch02: 24187648-24197647 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475835 5263 Asterids View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain