Gene : PGSC0003DMG400040452 S. tuberosum v4.03
Defline:  Integrase core domain containing protein Genomic Order:  11
Name:  ? PGSC0003DMG400040452 Secondary Identifier:  ? PAC:37425039
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400040452 0.5kb upstream 0.5kb upstream 8937 true ST4.03ch02: 292148-301084 Solanum tuberosum
PGSC0003DMG400040452 0.5kb upstream 0.5kb upstream 500 false ST4.03ch02: 292148-292647 Solanum tuberosum
PGSC0003DMG400040452 0.5kb downstream 0.5kb downstream 8937 true ST4.03ch02: 292648-301584 Solanum tuberosum
PGSC0003DMG400040452 0.5kb downstream 0.5kb downstream 500 false ST4.03ch02: 301085-301584 Solanum tuberosum
PGSC0003DMG400040452 1.0kb upstream 1.0kb upstream 9437 true ST4.03ch02: 291648-301084 Solanum tuberosum
PGSC0003DMG400040452 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch02: 291648-292647 Solanum tuberosum
PGSC0003DMG400040452 1.0kb downstream 1.0kb downstream 9437 true ST4.03ch02: 292648-302084 Solanum tuberosum
PGSC0003DMG400040452 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch02: 301085-302084 Solanum tuberosum
PGSC0003DMG400040452 2.0kb upstream 2.0kb upstream 10437 true ST4.03ch02: 290648-301084 Solanum tuberosum
PGSC0003DMG400040452 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch02: 290648-292647 Solanum tuberosum
PGSC0003DMG400040452 2.0kb downstream 2.0kb downstream 10437 true ST4.03ch02: 292648-303084 Solanum tuberosum
PGSC0003DMG400040452 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch02: 301085-303084 Solanum tuberosum
PGSC0003DMG400040452 5.0kb upstream 5.0kb upstream 13437 true ST4.03ch02: 287648-301084 Solanum tuberosum
PGSC0003DMG400040452 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch02: 287648-292647 Solanum tuberosum
PGSC0003DMG400040452 5.0kb downstream 5.0kb downstream 13437 true ST4.03ch02: 292648-306084 Solanum tuberosum
PGSC0003DMG400040452 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch02: 301085-306084 Solanum tuberosum
PGSC0003DMG400040452 10.0kb upstream 10.0kb upstream 18437 true ST4.03ch02: 282648-301084 Solanum tuberosum
PGSC0003DMG400040452 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch02: 282648-292647 Solanum tuberosum
PGSC0003DMG400040452 10.0kb downstream 10.0kb downstream 18437 true ST4.03ch02: 292648-311084 Solanum tuberosum
PGSC0003DMG400040452 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch02: 301085-311084 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121711558 5273 Angiosperm View MSA
121386642 5263 Asterids View MSA
123668023 5271 Pentapetalae View MSA
122701926 5272 Eudicot View MSA
120983313 5274 Embryophyte View MSA
123023533 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain