Gene : PGSC0003DMG400023338 S. tuberosum v4.03

Defline:  (1 of 1) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  2600
Name:  ? PGSC0003DMG400023338 Secondary Identifier:  ? PAC:37443663

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum HISTSYN-PWY Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400023338 0.5kb upstream 0.5kb upstream 6539 true ST4.03ch05: 51679021-51685559 Solanum tuberosum
PGSC0003DMG400023338 0.5kb upstream 0.5kb upstream 500 false ST4.03ch05: 51685060-51685559 Solanum tuberosum
PGSC0003DMG400023338 0.5kb downstream 0.5kb downstream 6539 true ST4.03ch05: 51678521-51685059 Solanum tuberosum
PGSC0003DMG400023338 0.5kb downstream 0.5kb downstream 500 false ST4.03ch05: 51678521-51679020 Solanum tuberosum
PGSC0003DMG400023338 1.0kb upstream 1.0kb upstream 7039 true ST4.03ch05: 51679021-51686059 Solanum tuberosum
PGSC0003DMG400023338 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch05: 51685060-51686059 Solanum tuberosum
PGSC0003DMG400023338 1.0kb downstream 1.0kb downstream 7039 true ST4.03ch05: 51678021-51685059 Solanum tuberosum
PGSC0003DMG400023338 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch05: 51678021-51679020 Solanum tuberosum
PGSC0003DMG400023338 2.0kb upstream 2.0kb upstream 8039 true ST4.03ch05: 51679021-51687059 Solanum tuberosum
PGSC0003DMG400023338 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch05: 51685060-51687059 Solanum tuberosum
PGSC0003DMG400023338 2.0kb downstream 2.0kb downstream 8039 true ST4.03ch05: 51677021-51685059 Solanum tuberosum
PGSC0003DMG400023338 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch05: 51677021-51679020 Solanum tuberosum
PGSC0003DMG400023338 5.0kb upstream 5.0kb upstream 11039 true ST4.03ch05: 51679021-51690059 Solanum tuberosum
PGSC0003DMG400023338 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch05: 51685060-51690059 Solanum tuberosum
PGSC0003DMG400023338 5.0kb downstream 5.0kb downstream 11039 true ST4.03ch05: 51674021-51685059 Solanum tuberosum
PGSC0003DMG400023338 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch05: 51674021-51679020 Solanum tuberosum
PGSC0003DMG400023338 10.0kb upstream 10.0kb upstream 16039 true ST4.03ch05: 51679021-51695059 Solanum tuberosum
PGSC0003DMG400023338 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch05: 51685060-51695059 Solanum tuberosum
PGSC0003DMG400023338 10.0kb downstream 10.0kb downstream 16039 true ST4.03ch05: 51669021-51685059 Solanum tuberosum
PGSC0003DMG400023338 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch05: 51669021-51679020 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
121468770 5263 Asterids View MSA
123737700 5271 Pentapetalae View MSA
122790553 5272 Eudicot View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain