Gene : PGSC0003DMG400023422 S. tuberosum v4.03
Defline:  (1 of 1) PTHR11946//PTHR11946:SF89 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // METHIONYL-TRNA SYNTHETASE Genomic Order:  2446
Name:  ? PGSC0003DMG400023422 Secondary Identifier:  ? PAC:37442930
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum TRNA-CHARGING-PWY Solanum tuberosum pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400023422 0.5kb upstream 0.5kb upstream 8157 true ST4.03ch05: 50339344-50347500 Solanum tuberosum
PGSC0003DMG400023422 0.5kb upstream 0.5kb upstream 500 false ST4.03ch05: 50347001-50347500 Solanum tuberosum
PGSC0003DMG400023422 0.5kb downstream 0.5kb downstream 8157 true ST4.03ch05: 50338844-50347000 Solanum tuberosum
PGSC0003DMG400023422 0.5kb downstream 0.5kb downstream 500 false ST4.03ch05: 50338844-50339343 Solanum tuberosum
PGSC0003DMG400023422 1.0kb upstream 1.0kb upstream 8657 true ST4.03ch05: 50339344-50348000 Solanum tuberosum
PGSC0003DMG400023422 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch05: 50347001-50348000 Solanum tuberosum
PGSC0003DMG400023422 1.0kb downstream 1.0kb downstream 8657 true ST4.03ch05: 50338344-50347000 Solanum tuberosum
PGSC0003DMG400023422 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch05: 50338344-50339343 Solanum tuberosum
PGSC0003DMG400023422 2.0kb upstream 2.0kb upstream 9657 true ST4.03ch05: 50339344-50349000 Solanum tuberosum
PGSC0003DMG400023422 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch05: 50347001-50349000 Solanum tuberosum
PGSC0003DMG400023422 2.0kb downstream 2.0kb downstream 9657 true ST4.03ch05: 50337344-50347000 Solanum tuberosum
PGSC0003DMG400023422 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch05: 50337344-50339343 Solanum tuberosum
PGSC0003DMG400023422 5.0kb upstream 5.0kb upstream 12657 true ST4.03ch05: 50339344-50352000 Solanum tuberosum
PGSC0003DMG400023422 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch05: 50347001-50352000 Solanum tuberosum
PGSC0003DMG400023422 5.0kb downstream 5.0kb downstream 12657 true ST4.03ch05: 50334344-50347000 Solanum tuberosum
PGSC0003DMG400023422 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch05: 50334344-50339343 Solanum tuberosum
PGSC0003DMG400023422 10.0kb upstream 10.0kb upstream 17657 true ST4.03ch05: 50339344-50357000 Solanum tuberosum
PGSC0003DMG400023422 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch05: 50347001-50357000 Solanum tuberosum
PGSC0003DMG400023422 10.0kb downstream 10.0kb downstream 17657 true ST4.03ch05: 50329344-50347000 Solanum tuberosum
PGSC0003DMG400023422 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch05: 50329344-50339343 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475121 5263 Asterids View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain