Gene : PGSC0003DMG400000188 S. tuberosum v4.03
Defline:  (1 of 1) PTHR12358//PTHR12358:SF43 - SPHINGOSINE KINASE // SPHINGOID LONG-CHAIN BASES KINASE 2, MITOCHONDRIAL Genomic Order:  3063
Name:  ? PGSC0003DMG400000188 Secondary Identifier:  ? PAC:37440194
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-7039 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400000188 0.5kb upstream 0.5kb upstream 5472 true ST4.03ch01: 72574531-72580002 Solanum tuberosum
PGSC0003DMG400000188 0.5kb upstream 0.5kb upstream 500 false ST4.03ch01: 72579503-72580002 Solanum tuberosum
PGSC0003DMG400000188 0.5kb downstream 0.5kb downstream 5472 true ST4.03ch01: 72574031-72579502 Solanum tuberosum
PGSC0003DMG400000188 0.5kb downstream 0.5kb downstream 500 false ST4.03ch01: 72574031-72574530 Solanum tuberosum
PGSC0003DMG400000188 1.0kb upstream 1.0kb upstream 5972 true ST4.03ch01: 72574531-72580502 Solanum tuberosum
PGSC0003DMG400000188 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch01: 72579503-72580502 Solanum tuberosum
PGSC0003DMG400000188 1.0kb downstream 1.0kb downstream 5972 true ST4.03ch01: 72573531-72579502 Solanum tuberosum
PGSC0003DMG400000188 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch01: 72573531-72574530 Solanum tuberosum
PGSC0003DMG400000188 2.0kb upstream 2.0kb upstream 6972 true ST4.03ch01: 72574531-72581502 Solanum tuberosum
PGSC0003DMG400000188 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch01: 72579503-72581502 Solanum tuberosum
PGSC0003DMG400000188 2.0kb downstream 2.0kb downstream 6972 true ST4.03ch01: 72572531-72579502 Solanum tuberosum
PGSC0003DMG400000188 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch01: 72572531-72574530 Solanum tuberosum
PGSC0003DMG400000188 5.0kb upstream 5.0kb upstream 9972 true ST4.03ch01: 72574531-72584502 Solanum tuberosum
PGSC0003DMG400000188 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch01: 72579503-72584502 Solanum tuberosum
PGSC0003DMG400000188 5.0kb downstream 5.0kb downstream 9972 true ST4.03ch01: 72569531-72579502 Solanum tuberosum
PGSC0003DMG400000188 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch01: 72569531-72574530 Solanum tuberosum
PGSC0003DMG400000188 10.0kb upstream 10.0kb upstream 14972 true ST4.03ch01: 72574531-72589502 Solanum tuberosum
PGSC0003DMG400000188 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch01: 72579503-72589502 Solanum tuberosum
PGSC0003DMG400000188 10.0kb downstream 10.0kb downstream 14972 true ST4.03ch01: 72564531-72579502 Solanum tuberosum
PGSC0003DMG400000188 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch01: 72564531-72574530 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469933 5263 Asterids View MSA
123747106 5271 Pentapetalae View MSA
122789016 5272 Eudicot View MSA
122043667 5273 Angiosperm View MSA
121344203 5274 Embryophyte View MSA
123380000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain