Gene : PGSC0003DMG400025884 S. tuberosum v4.03
Defline:  (1 of 1) PTHR22849//PTHR22849:SF52 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Genomic Order:  4232
Name:  ? PGSC0003DMG400025884 Secondary Identifier:  ? PAC:37435330
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-7511 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400025884 0.5kb upstream 0.5kb upstream 1748 true ST4.03ch01: 84368054-84369801 Solanum tuberosum
PGSC0003DMG400025884 0.5kb upstream 0.5kb upstream 500 false ST4.03ch01: 84369302-84369801 Solanum tuberosum
PGSC0003DMG400025884 0.5kb downstream 0.5kb downstream 1748 true ST4.03ch01: 84367554-84369301 Solanum tuberosum
PGSC0003DMG400025884 0.5kb downstream 0.5kb downstream 500 false ST4.03ch01: 84367554-84368053 Solanum tuberosum
PGSC0003DMG400025884 1.0kb upstream 1.0kb upstream 2248 true ST4.03ch01: 84368054-84370301 Solanum tuberosum
PGSC0003DMG400025884 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch01: 84369302-84370301 Solanum tuberosum
PGSC0003DMG400025884 1.0kb downstream 1.0kb downstream 2248 true ST4.03ch01: 84367054-84369301 Solanum tuberosum
PGSC0003DMG400025884 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch01: 84367054-84368053 Solanum tuberosum
PGSC0003DMG400025884 2.0kb upstream 2.0kb upstream 3248 true ST4.03ch01: 84368054-84371301 Solanum tuberosum
PGSC0003DMG400025884 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch01: 84369302-84371301 Solanum tuberosum
PGSC0003DMG400025884 2.0kb downstream 2.0kb downstream 3248 true ST4.03ch01: 84366054-84369301 Solanum tuberosum
PGSC0003DMG400025884 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch01: 84366054-84368053 Solanum tuberosum
PGSC0003DMG400025884 5.0kb upstream 5.0kb upstream 6248 true ST4.03ch01: 84368054-84374301 Solanum tuberosum
PGSC0003DMG400025884 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch01: 84369302-84374301 Solanum tuberosum
PGSC0003DMG400025884 5.0kb downstream 5.0kb downstream 6248 true ST4.03ch01: 84363054-84369301 Solanum tuberosum
PGSC0003DMG400025884 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch01: 84363054-84368053 Solanum tuberosum
PGSC0003DMG400025884 10.0kb upstream 10.0kb upstream 11248 true ST4.03ch01: 84368054-84379301 Solanum tuberosum
PGSC0003DMG400025884 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch01: 84369302-84379301 Solanum tuberosum
PGSC0003DMG400025884 10.0kb downstream 10.0kb downstream 11248 true ST4.03ch01: 84358054-84369301 Solanum tuberosum
PGSC0003DMG400025884 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch01: 84358054-84368053 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480674 5263 Asterids View MSA
123740066 5271 Pentapetalae View MSA
122793707 5272 Eudicot View MSA
122045522 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain