Gene : PGSC0003DMG400024884 S. tuberosum v4.03

Defline:  (1 of 1) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) Genomic Order:  3787
Name:  ? PGSC0003DMG400024884 Secondary Identifier:  ? PAC:37440760

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400024884 0.5kb upstream 0.5kb upstream 8687 true ST4.03ch01: 80123274-80131960 Solanum tuberosum
PGSC0003DMG400024884 0.5kb upstream 0.5kb upstream 500 false ST4.03ch01: 80123274-80123773 Solanum tuberosum
PGSC0003DMG400024884 0.5kb downstream 0.5kb downstream 8687 true ST4.03ch01: 80123774-80132460 Solanum tuberosum
PGSC0003DMG400024884 0.5kb downstream 0.5kb downstream 500 false ST4.03ch01: 80131961-80132460 Solanum tuberosum
PGSC0003DMG400024884 1.0kb upstream 1.0kb upstream 9187 true ST4.03ch01: 80122774-80131960 Solanum tuberosum
PGSC0003DMG400024884 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch01: 80122774-80123773 Solanum tuberosum
PGSC0003DMG400024884 1.0kb downstream 1.0kb downstream 9187 true ST4.03ch01: 80123774-80132960 Solanum tuberosum
PGSC0003DMG400024884 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch01: 80131961-80132960 Solanum tuberosum
PGSC0003DMG400024884 2.0kb upstream 2.0kb upstream 10187 true ST4.03ch01: 80121774-80131960 Solanum tuberosum
PGSC0003DMG400024884 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch01: 80121774-80123773 Solanum tuberosum
PGSC0003DMG400024884 2.0kb downstream 2.0kb downstream 10187 true ST4.03ch01: 80123774-80133960 Solanum tuberosum
PGSC0003DMG400024884 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch01: 80131961-80133960 Solanum tuberosum
PGSC0003DMG400024884 5.0kb upstream 5.0kb upstream 13187 true ST4.03ch01: 80118774-80131960 Solanum tuberosum
PGSC0003DMG400024884 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch01: 80118774-80123773 Solanum tuberosum
PGSC0003DMG400024884 5.0kb downstream 5.0kb downstream 13187 true ST4.03ch01: 80123774-80136960 Solanum tuberosum
PGSC0003DMG400024884 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch01: 80131961-80136960 Solanum tuberosum
PGSC0003DMG400024884 10.0kb upstream 10.0kb upstream 18187 true ST4.03ch01: 80113774-80131960 Solanum tuberosum
PGSC0003DMG400024884 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch01: 80113774-80123773 Solanum tuberosum
PGSC0003DMG400024884 10.0kb downstream 10.0kb downstream 18187 true ST4.03ch01: 80123774-80141960 Solanum tuberosum
PGSC0003DMG400024884 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch01: 80131961-80141960 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
121476335 5263 Asterids View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain