Protein Family : Nonsense-mediated decay protein Upf3 121476335

Method ID:  5263 Method Name:  Asterids
Sequence Alignment:  View MSA Member Count:  11

11 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Migut.N00848 (1 of 2) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN M. guttatus v2.0 8339   scaffold_14: 5290122-5298460
Migut.B00752 (1 of 2) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN M. guttatus v2.0 6959   scaffold_2: 4264224-4271182
DCAR_029162 (1 of 2) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) D. carota v2.0 7287   DCARv2_Chr9: 2372328-2379614
DCAR_006663 (1 of 2) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) D. carota v2.0 9054   DCARv2_Chr2: 27553526-27562579
Solyc01g103420.2 (1 of 2) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) S. lycopersicum ITAG2.4 11908   SL2.50ch01: 92025531-92037438
PGSC0003DMG400024884 (1 of 1) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) S. tuberosum v4.03 8187   ST4.03ch01: 80123774-80131960
Oeu043625.3 (1 of 2) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) O. europaea v1.0 8025   chr3: 3005353-3013377
Oeu045913.1 (1 of 2) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) O. europaea v1.0 19619   chr5: 15041785-15061403
Lsat_1_v5_gn_9_119700 (1 of 2) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) L. sativa V8 4063   Lsat_1_v8_lg_9: 195858175-195862237
HanXRQChr03g0067961 (1 of 1) KOG1295 - Nonsense-mediated decay protein Upf3 H. annuus r1.2 12607   HanXRQChr03: 52585629-52598235
HanXRQChr09g0249081 (1 of 3) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) H. annuus r1.2 8643   HanXRQChr09: 84613785-84622427

11 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
DCAR_029162 D. carota v2.0 121476335 Nonsense-mediated decay protein Upf3 2 5263 Asterids
Solyc01g103420.2.1 S. lycopersicum ITAG2.4 121476335 Nonsense-mediated decay protein Upf3 1 5263 Asterids
PGSC0003DMP400043138 S. tuberosum v4.03 121476335 Nonsense-mediated decay protein Upf3 1 5263 Asterids
Oeu043625.3 O. europaea v1.0 121476335 Nonsense-mediated decay protein Upf3 2 5263 Asterids
Oeu045913.1 O. europaea v1.0 121476335 Nonsense-mediated decay protein Upf3 2 5263 Asterids
Lsat_1_v5_gn_9_119700.1 L. sativa V8 121476335 Nonsense-mediated decay protein Upf3 1 5263 Asterids
Migut.N00848.1.p M. guttatus v2.0 121476335 Nonsense-mediated decay protein Upf3 2 5263 Asterids
Migut.B00752.1.p M. guttatus v2.0 121476335 Nonsense-mediated decay protein Upf3 2 5263 Asterids
DCAR_006663 D. carota v2.0 121476335 Nonsense-mediated decay protein Upf3 2 5263 Asterids
HanXRQChr09g0249081 H. annuus r1.2 121476335 Nonsense-mediated decay protein Upf3 2 5263 Asterids
HanXRQChr03g0067961 H. annuus r1.2 121476335 Nonsense-mediated decay protein Upf3 2 5263 Asterids