Gene : PGSC0003DMG400014235 S. tuberosum v4.03
Defline:  (1 of 48) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  3103
Name:  ? PGSC0003DMG400014235 Secondary Identifier:  ? PAC:37460190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400014235 0.5kb upstream 0.5kb upstream 1769 true ST4.03ch03: 57777053-57778821 Solanum tuberosum
PGSC0003DMG400014235 0.5kb upstream 0.5kb upstream 500 false ST4.03ch03: 57778322-57778821 Solanum tuberosum
PGSC0003DMG400014235 0.5kb downstream 0.5kb downstream 1769 true ST4.03ch03: 57776553-57778321 Solanum tuberosum
PGSC0003DMG400014235 0.5kb downstream 0.5kb downstream 500 false ST4.03ch03: 57776553-57777052 Solanum tuberosum
PGSC0003DMG400014235 1.0kb upstream 1.0kb upstream 2269 true ST4.03ch03: 57777053-57779321 Solanum tuberosum
PGSC0003DMG400014235 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch03: 57778322-57779321 Solanum tuberosum
PGSC0003DMG400014235 1.0kb downstream 1.0kb downstream 2269 true ST4.03ch03: 57776053-57778321 Solanum tuberosum
PGSC0003DMG400014235 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch03: 57776053-57777052 Solanum tuberosum
PGSC0003DMG400014235 2.0kb upstream 2.0kb upstream 3269 true ST4.03ch03: 57777053-57780321 Solanum tuberosum
PGSC0003DMG400014235 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch03: 57778322-57780321 Solanum tuberosum
PGSC0003DMG400014235 2.0kb downstream 2.0kb downstream 3269 true ST4.03ch03: 57775053-57778321 Solanum tuberosum
PGSC0003DMG400014235 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch03: 57775053-57777052 Solanum tuberosum
PGSC0003DMG400014235 5.0kb upstream 5.0kb upstream 6269 true ST4.03ch03: 57777053-57783321 Solanum tuberosum
PGSC0003DMG400014235 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch03: 57778322-57783321 Solanum tuberosum
PGSC0003DMG400014235 5.0kb downstream 5.0kb downstream 6269 true ST4.03ch03: 57772053-57778321 Solanum tuberosum
PGSC0003DMG400014235 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch03: 57772053-57777052 Solanum tuberosum
PGSC0003DMG400014235 10.0kb upstream 10.0kb upstream 11269 true ST4.03ch03: 57777053-57788321 Solanum tuberosum
PGSC0003DMG400014235 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch03: 57778322-57788321 Solanum tuberosum
PGSC0003DMG400014235 10.0kb downstream 10.0kb downstream 11269 true ST4.03ch03: 57767053-57778321 Solanum tuberosum
PGSC0003DMG400014235 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch03: 57767053-57777052 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472874 5263 Asterids View MSA
123737959 5271 Pentapetalae View MSA
122788156 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain