Gene : PGSC0003DMG400017310 S. tuberosum v4.03

Defline:  (1 of 64) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2037
Name:  ? PGSC0003DMG400017310 Secondary Identifier:  ? PAC:37431003

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400017310 0.5kb upstream 0.5kb upstream 2477 true ST4.03ch07: 50420278-50422754 Solanum tuberosum
PGSC0003DMG400017310 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 50422255-50422754 Solanum tuberosum
PGSC0003DMG400017310 0.5kb downstream 0.5kb downstream 2477 true ST4.03ch07: 50419778-50422254 Solanum tuberosum
PGSC0003DMG400017310 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 50419778-50420277 Solanum tuberosum
PGSC0003DMG400017310 1.0kb upstream 1.0kb upstream 2977 true ST4.03ch07: 50420278-50423254 Solanum tuberosum
PGSC0003DMG400017310 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 50422255-50423254 Solanum tuberosum
PGSC0003DMG400017310 1.0kb downstream 1.0kb downstream 2977 true ST4.03ch07: 50419278-50422254 Solanum tuberosum
PGSC0003DMG400017310 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 50419278-50420277 Solanum tuberosum
PGSC0003DMG400017310 2.0kb upstream 2.0kb upstream 3977 true ST4.03ch07: 50420278-50424254 Solanum tuberosum
PGSC0003DMG400017310 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 50422255-50424254 Solanum tuberosum
PGSC0003DMG400017310 2.0kb downstream 2.0kb downstream 3977 true ST4.03ch07: 50418278-50422254 Solanum tuberosum
PGSC0003DMG400017310 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 50418278-50420277 Solanum tuberosum
PGSC0003DMG400017310 5.0kb upstream 5.0kb upstream 6977 true ST4.03ch07: 50420278-50427254 Solanum tuberosum
PGSC0003DMG400017310 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 50422255-50427254 Solanum tuberosum
PGSC0003DMG400017310 5.0kb downstream 5.0kb downstream 6977 true ST4.03ch07: 50415278-50422254 Solanum tuberosum
PGSC0003DMG400017310 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 50415278-50420277 Solanum tuberosum
PGSC0003DMG400017310 10.0kb upstream 10.0kb upstream 11977 true ST4.03ch07: 50420278-50432254 Solanum tuberosum
PGSC0003DMG400017310 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 50422255-50432254 Solanum tuberosum
PGSC0003DMG400017310 10.0kb downstream 10.0kb downstream 11977 true ST4.03ch07: 50410278-50422254 Solanum tuberosum
PGSC0003DMG400017310 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 50410278-50420277 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026268 5273 Angiosperm View MSA
121473324 5263 Asterids View MSA
123739998 5271 Pentapetalae View MSA
122787628 5272 Eudicot View MSA
121296253 5274 Embryophyte View MSA
123334450 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain