Gene : PGSC0003DMG400005886 S. tuberosum v4.03
Defline:  (1 of 1) K14594 - neoxanthin synthase (NSY) Genomic Order:  2752
Name:  ? PGSC0003DMG400005886 Secondary Identifier:  ? PAC:37452834
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum PWY-6809 Solanum tuberosum pathologic  
Stuberosum PWY-695 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400005886 0.5kb upstream 0.5kb upstream 1997 true ST4.03ch06: 54775167-54777163 Solanum tuberosum
PGSC0003DMG400005886 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 54776664-54777163 Solanum tuberosum
PGSC0003DMG400005886 0.5kb downstream 0.5kb downstream 1997 true ST4.03ch06: 54774667-54776663 Solanum tuberosum
PGSC0003DMG400005886 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 54774667-54775166 Solanum tuberosum
PGSC0003DMG400005886 1.0kb upstream 1.0kb upstream 2497 true ST4.03ch06: 54775167-54777663 Solanum tuberosum
PGSC0003DMG400005886 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 54776664-54777663 Solanum tuberosum
PGSC0003DMG400005886 1.0kb downstream 1.0kb downstream 2497 true ST4.03ch06: 54774167-54776663 Solanum tuberosum
PGSC0003DMG400005886 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 54774167-54775166 Solanum tuberosum
PGSC0003DMG400005886 2.0kb upstream 2.0kb upstream 3497 true ST4.03ch06: 54775167-54778663 Solanum tuberosum
PGSC0003DMG400005886 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 54776664-54778663 Solanum tuberosum
PGSC0003DMG400005886 2.0kb downstream 2.0kb downstream 3497 true ST4.03ch06: 54773167-54776663 Solanum tuberosum
PGSC0003DMG400005886 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 54773167-54775166 Solanum tuberosum
PGSC0003DMG400005886 5.0kb upstream 5.0kb upstream 6497 true ST4.03ch06: 54775167-54781663 Solanum tuberosum
PGSC0003DMG400005886 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 54776664-54781663 Solanum tuberosum
PGSC0003DMG400005886 5.0kb downstream 5.0kb downstream 6497 true ST4.03ch06: 54770167-54776663 Solanum tuberosum
PGSC0003DMG400005886 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 54770167-54775166 Solanum tuberosum
PGSC0003DMG400005886 10.0kb upstream 10.0kb upstream 11497 true ST4.03ch06: 54775167-54786663 Solanum tuberosum
PGSC0003DMG400005886 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 54776664-54786663 Solanum tuberosum
PGSC0003DMG400005886 10.0kb downstream 10.0kb downstream 11497 true ST4.03ch06: 54765167-54776663 Solanum tuberosum
PGSC0003DMG400005886 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 54765167-54775166 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470530 5263 Asterids View MSA
123749598 5271 Pentapetalae View MSA
122795342 5272 Eudicot View MSA
122048987 5273 Angiosperm View MSA
121311196 5274 Embryophyte View MSA
123348524 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain