Gene : PGSC0003DMG400005466 S. tuberosum v4.03

Defline:  (1 of 6) K02927 - large subunit ribosomal protein L40e (RP-L40e, RPL40) Genomic Order:  1431
Name:  ? PGSC0003DMG400005466 Secondary Identifier:  ? PAC:37450461

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400005466 0.5kb upstream 0.5kb upstream 2169 true ST4.03ch06: 38782959-38785127 Solanum tuberosum
PGSC0003DMG400005466 0.5kb upstream 0.5kb upstream 500 false ST4.03ch06: 38782959-38783458 Solanum tuberosum
PGSC0003DMG400005466 0.5kb downstream 0.5kb downstream 2169 true ST4.03ch06: 38783459-38785627 Solanum tuberosum
PGSC0003DMG400005466 0.5kb downstream 0.5kb downstream 500 false ST4.03ch06: 38785128-38785627 Solanum tuberosum
PGSC0003DMG400005466 1.0kb upstream 1.0kb upstream 2669 true ST4.03ch06: 38782459-38785127 Solanum tuberosum
PGSC0003DMG400005466 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch06: 38782459-38783458 Solanum tuberosum
PGSC0003DMG400005466 1.0kb downstream 1.0kb downstream 2669 true ST4.03ch06: 38783459-38786127 Solanum tuberosum
PGSC0003DMG400005466 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch06: 38785128-38786127 Solanum tuberosum
PGSC0003DMG400005466 2.0kb upstream 2.0kb upstream 3669 true ST4.03ch06: 38781459-38785127 Solanum tuberosum
PGSC0003DMG400005466 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch06: 38781459-38783458 Solanum tuberosum
PGSC0003DMG400005466 2.0kb downstream 2.0kb downstream 3669 true ST4.03ch06: 38783459-38787127 Solanum tuberosum
PGSC0003DMG400005466 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch06: 38785128-38787127 Solanum tuberosum
PGSC0003DMG400005466 5.0kb upstream 5.0kb upstream 6669 true ST4.03ch06: 38778459-38785127 Solanum tuberosum
PGSC0003DMG400005466 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch06: 38778459-38783458 Solanum tuberosum
PGSC0003DMG400005466 5.0kb downstream 5.0kb downstream 6669 true ST4.03ch06: 38783459-38790127 Solanum tuberosum
PGSC0003DMG400005466 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch06: 38785128-38790127 Solanum tuberosum
PGSC0003DMG400005466 10.0kb upstream 10.0kb upstream 11669 true ST4.03ch06: 38773459-38785127 Solanum tuberosum
PGSC0003DMG400005466 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch06: 38773459-38783458 Solanum tuberosum
PGSC0003DMG400005466 10.0kb downstream 10.0kb downstream 11669 true ST4.03ch06: 38783459-38795127 Solanum tuberosum
PGSC0003DMG400005466 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch06: 38785128-38795127 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121389928 5263 Asterids View MSA
123754617 5271 Pentapetalae View MSA
122775977 5272 Eudicot View MSA
122050611 5273 Angiosperm View MSA
121312025 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain