Gene : PGSC0003DMG400011163 S. tuberosum v4.03
Defline:  (1 of 1) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  127
Name:  ? PGSC0003DMG400011163 Secondary Identifier:  ? PAC:37431627
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Stuberosum ANAEROFRUCAT-PWY Solanum tuberosum pathologic  
Stuberosum ANAGLYCOLYSIS-PWY Solanum tuberosum pathologic  
Stuberosum GLUCOSE1PMETAB-PWY Solanum tuberosum pathologic  
Stuberosum PWY-621 Solanum tuberosum pathologic  
Stuberosum PWY-7238 Solanum tuberosum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PGSC0003DMG400011163 0.5kb upstream 0.5kb upstream 5478 true ST4.03ch07: 1517784-1523261 Solanum tuberosum
PGSC0003DMG400011163 0.5kb upstream 0.5kb upstream 500 false ST4.03ch07: 1517784-1518283 Solanum tuberosum
PGSC0003DMG400011163 0.5kb downstream 0.5kb downstream 5478 true ST4.03ch07: 1518284-1523761 Solanum tuberosum
PGSC0003DMG400011163 0.5kb downstream 0.5kb downstream 500 false ST4.03ch07: 1523262-1523761 Solanum tuberosum
PGSC0003DMG400011163 1.0kb upstream 1.0kb upstream 5978 true ST4.03ch07: 1517284-1523261 Solanum tuberosum
PGSC0003DMG400011163 1.0kb upstream 1.0kb upstream 1000 false ST4.03ch07: 1517284-1518283 Solanum tuberosum
PGSC0003DMG400011163 1.0kb downstream 1.0kb downstream 5978 true ST4.03ch07: 1518284-1524261 Solanum tuberosum
PGSC0003DMG400011163 1.0kb downstream 1.0kb downstream 1000 false ST4.03ch07: 1523262-1524261 Solanum tuberosum
PGSC0003DMG400011163 2.0kb upstream 2.0kb upstream 6978 true ST4.03ch07: 1516284-1523261 Solanum tuberosum
PGSC0003DMG400011163 2.0kb upstream 2.0kb upstream 2000 false ST4.03ch07: 1516284-1518283 Solanum tuberosum
PGSC0003DMG400011163 2.0kb downstream 2.0kb downstream 6978 true ST4.03ch07: 1518284-1525261 Solanum tuberosum
PGSC0003DMG400011163 2.0kb downstream 2.0kb downstream 2000 false ST4.03ch07: 1523262-1525261 Solanum tuberosum
PGSC0003DMG400011163 5.0kb upstream 5.0kb upstream 9978 true ST4.03ch07: 1513284-1523261 Solanum tuberosum
PGSC0003DMG400011163 5.0kb upstream 5.0kb upstream 5000 false ST4.03ch07: 1513284-1518283 Solanum tuberosum
PGSC0003DMG400011163 5.0kb downstream 5.0kb downstream 9978 true ST4.03ch07: 1518284-1528261 Solanum tuberosum
PGSC0003DMG400011163 5.0kb downstream 5.0kb downstream 5000 false ST4.03ch07: 1523262-1528261 Solanum tuberosum
PGSC0003DMG400011163 10.0kb upstream 10.0kb upstream 14978 true ST4.03ch07: 1508284-1523261 Solanum tuberosum
PGSC0003DMG400011163 10.0kb upstream 10.0kb upstream 10000 false ST4.03ch07: 1508284-1518283 Solanum tuberosum
PGSC0003DMG400011163 10.0kb downstream 10.0kb downstream 14978 true ST4.03ch07: 1518284-1533261 Solanum tuberosum
PGSC0003DMG400011163 10.0kb downstream 10.0kb downstream 10000 false ST4.03ch07: 1523262-1533261 Solanum tuberosum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470841 5263 Asterids View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain