Gene : Thecc1EG046381 T. cacao v1.1
Defline:  (1 of 2) K02705 - photosystem II CP43 chlorophyll apoprotein (psbC) Genomic Order:  11
Name:  ? Thecc1EG046381 Secondary Identifier:  ? PAC:27459531
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046381 0.5kb upstream 0.5kb upstream 110689 true cacao1chloroplast: 34076-144764 Theobroma cacao
Thecc1EG046381 0.5kb upstream 0.5kb upstream 500 false cacao1chloroplast: 34076-34575 Theobroma cacao
Thecc1EG046381 0.5kb downstream 0.5kb downstream 110689 true cacao1chloroplast: 34576-145264 Theobroma cacao
Thecc1EG046381 0.5kb downstream 0.5kb downstream 500 false cacao1chloroplast: 144765-145264 Theobroma cacao
Thecc1EG046381 1.0kb upstream 1.0kb upstream 111189 true cacao1chloroplast: 33576-144764 Theobroma cacao
Thecc1EG046381 1.0kb upstream 1.0kb upstream 1000 false cacao1chloroplast: 33576-34575 Theobroma cacao
Thecc1EG046381 1.0kb downstream 1.0kb downstream 111189 true cacao1chloroplast: 34576-145764 Theobroma cacao
Thecc1EG046381 1.0kb downstream 1.0kb downstream 1000 false cacao1chloroplast: 144765-145764 Theobroma cacao
Thecc1EG046381 2.0kb upstream 2.0kb upstream 112189 true cacao1chloroplast: 32576-144764 Theobroma cacao
Thecc1EG046381 2.0kb upstream 2.0kb upstream 2000 false cacao1chloroplast: 32576-34575 Theobroma cacao
Thecc1EG046381 2.0kb downstream 2.0kb downstream 112189 true cacao1chloroplast: 34576-146764 Theobroma cacao
Thecc1EG046381 2.0kb downstream 2.0kb downstream 2000 false cacao1chloroplast: 144765-146764 Theobroma cacao
Thecc1EG046381 5.0kb upstream 5.0kb upstream 115189 true cacao1chloroplast: 29576-144764 Theobroma cacao
Thecc1EG046381 5.0kb upstream 5.0kb upstream 5000 false cacao1chloroplast: 29576-34575 Theobroma cacao
Thecc1EG046381 5.0kb downstream 5.0kb downstream 115189 true cacao1chloroplast: 34576-149764 Theobroma cacao
Thecc1EG046381 5.0kb downstream 5.0kb downstream 5000 false cacao1chloroplast: 144765-149764 Theobroma cacao
Thecc1EG046381 10.0kb upstream 10.0kb upstream 120189 true cacao1chloroplast: 24576-144764 Theobroma cacao
Thecc1EG046381 10.0kb upstream 10.0kb upstream 10000 false cacao1chloroplast: 24576-34575 Theobroma cacao
Thecc1EG046381 10.0kb downstream 10.0kb downstream 120189 true cacao1chloroplast: 34576-154764 Theobroma cacao
Thecc1EG046381 10.0kb downstream 10.0kb downstream 10000 false cacao1chloroplast: 144765-154764 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828729 5264 Brassicales-Malvales View MSA
124321552 5266 SBM View MSA
124248141 5268 Malvidae View MSA
124038128 5270 Rosid View MSA
123751197 5271 Pentapetalae View MSA
122773946 5272 Eudicot View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain