Gene : Thecc1EG046398 T. cacao v1.1
Defline:  (1 of 1) K02635 - cytochrome b6 (petB) Genomic Order:  27
Name:  ? Thecc1EG046398 Secondary Identifier:  ? PAC:27459551
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-101 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG046398 0.5kb upstream 0.5kb upstream 2631 true cacao1chloroplast: 78281-80911 Theobroma cacao
Thecc1EG046398 0.5kb upstream 0.5kb upstream 500 false cacao1chloroplast: 78281-78780 Theobroma cacao
Thecc1EG046398 0.5kb downstream 0.5kb downstream 2631 true cacao1chloroplast: 78781-81411 Theobroma cacao
Thecc1EG046398 0.5kb downstream 0.5kb downstream 500 false cacao1chloroplast: 80912-81411 Theobroma cacao
Thecc1EG046398 1.0kb upstream 1.0kb upstream 3131 true cacao1chloroplast: 77781-80911 Theobroma cacao
Thecc1EG046398 1.0kb upstream 1.0kb upstream 1000 false cacao1chloroplast: 77781-78780 Theobroma cacao
Thecc1EG046398 1.0kb downstream 1.0kb downstream 3131 true cacao1chloroplast: 78781-81911 Theobroma cacao
Thecc1EG046398 1.0kb downstream 1.0kb downstream 1000 false cacao1chloroplast: 80912-81911 Theobroma cacao
Thecc1EG046398 2.0kb upstream 2.0kb upstream 4131 true cacao1chloroplast: 76781-80911 Theobroma cacao
Thecc1EG046398 2.0kb upstream 2.0kb upstream 2000 false cacao1chloroplast: 76781-78780 Theobroma cacao
Thecc1EG046398 2.0kb downstream 2.0kb downstream 4131 true cacao1chloroplast: 78781-82911 Theobroma cacao
Thecc1EG046398 2.0kb downstream 2.0kb downstream 2000 false cacao1chloroplast: 80912-82911 Theobroma cacao
Thecc1EG046398 5.0kb upstream 5.0kb upstream 7131 true cacao1chloroplast: 73781-80911 Theobroma cacao
Thecc1EG046398 5.0kb upstream 5.0kb upstream 5000 false cacao1chloroplast: 73781-78780 Theobroma cacao
Thecc1EG046398 5.0kb downstream 5.0kb downstream 7131 true cacao1chloroplast: 78781-85911 Theobroma cacao
Thecc1EG046398 5.0kb downstream 5.0kb downstream 5000 false cacao1chloroplast: 80912-85911 Theobroma cacao
Thecc1EG046398 10.0kb upstream 10.0kb upstream 12131 true cacao1chloroplast: 68781-80911 Theobroma cacao
Thecc1EG046398 10.0kb upstream 10.0kb upstream 10000 false cacao1chloroplast: 68781-78780 Theobroma cacao
Thecc1EG046398 10.0kb downstream 10.0kb downstream 12131 true cacao1chloroplast: 78781-90911 Theobroma cacao
Thecc1EG046398 10.0kb downstream 10.0kb downstream 10000 false cacao1chloroplast: 80912-90911 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841093 5264 Brassicales-Malvales View MSA
124322841 5266 SBM View MSA
124254317 5268 Malvidae View MSA
124051319 5270 Rosid View MSA
123751133 5271 Pentapetalae View MSA
122795753 5272 Eudicot View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain