Gene : Thecc1EG000127 T. cacao v1.1
Defline:  (1 of 1) K03006 - DNA-directed RNA polymerase II subunit RPB1 (RPB1, POLR2A) Genomic Order:  105
Name:  ? Thecc1EG000127 Secondary Identifier:  ? PAC:27432261
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000127 0.5kb upstream 0.5kb upstream 10556 true scaffold_1: 506233-516788 Theobroma cacao
Thecc1EG000127 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 516289-516788 Theobroma cacao
Thecc1EG000127 0.5kb downstream 0.5kb downstream 10556 true scaffold_1: 505733-516288 Theobroma cacao
Thecc1EG000127 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 505733-506232 Theobroma cacao
Thecc1EG000127 1.0kb upstream 1.0kb upstream 11056 true scaffold_1: 506233-517288 Theobroma cacao
Thecc1EG000127 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 516289-517288 Theobroma cacao
Thecc1EG000127 1.0kb downstream 1.0kb downstream 11056 true scaffold_1: 505233-516288 Theobroma cacao
Thecc1EG000127 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 505233-506232 Theobroma cacao
Thecc1EG000127 2.0kb upstream 2.0kb upstream 12056 true scaffold_1: 506233-518288 Theobroma cacao
Thecc1EG000127 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 516289-518288 Theobroma cacao
Thecc1EG000127 2.0kb downstream 2.0kb downstream 12056 true scaffold_1: 504233-516288 Theobroma cacao
Thecc1EG000127 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 504233-506232 Theobroma cacao
Thecc1EG000127 5.0kb upstream 5.0kb upstream 15056 true scaffold_1: 506233-521288 Theobroma cacao
Thecc1EG000127 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 516289-521288 Theobroma cacao
Thecc1EG000127 5.0kb downstream 5.0kb downstream 15056 true scaffold_1: 501233-516288 Theobroma cacao
Thecc1EG000127 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 501233-506232 Theobroma cacao
Thecc1EG000127 10.0kb upstream 10.0kb upstream 20056 true scaffold_1: 506233-526288 Theobroma cacao
Thecc1EG000127 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 516289-526288 Theobroma cacao
Thecc1EG000127 10.0kb downstream 10.0kb downstream 20056 true scaffold_1: 496233-516288 Theobroma cacao
Thecc1EG000127 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 496233-506232 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041040 5273 Angiosperm View MSA
123829151 5264 Brassicales-Malvales View MSA
124338687 5266 SBM View MSA
124237204 5268 Malvidae View MSA
124064405 5270 Rosid View MSA
123740882 5271 Pentapetalae View MSA
122790504 5272 Eudicot View MSA
121343935 5274 Embryophyte View MSA
123424077 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain