Gene : Thecc1EG000523 T. cacao v1.1
Defline:  (1 of 2) PTHR14237:SF31 - CATALYTIC/ PYRIDOXAL PHOSPHATE BINDING PROTEIN Genomic Order:  451
Name:  ? Thecc1EG000523 Secondary Identifier:  ? PAC:27432446
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5963 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000523 0.5kb upstream 0.5kb upstream 5222 true scaffold_1: 2172052-2177273 Theobroma cacao
Thecc1EG000523 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 2176774-2177273 Theobroma cacao
Thecc1EG000523 0.5kb downstream 0.5kb downstream 5222 true scaffold_1: 2171552-2176773 Theobroma cacao
Thecc1EG000523 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 2171552-2172051 Theobroma cacao
Thecc1EG000523 1.0kb upstream 1.0kb upstream 5722 true scaffold_1: 2172052-2177773 Theobroma cacao
Thecc1EG000523 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 2176774-2177773 Theobroma cacao
Thecc1EG000523 1.0kb downstream 1.0kb downstream 5722 true scaffold_1: 2171052-2176773 Theobroma cacao
Thecc1EG000523 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 2171052-2172051 Theobroma cacao
Thecc1EG000523 2.0kb upstream 2.0kb upstream 6722 true scaffold_1: 2172052-2178773 Theobroma cacao
Thecc1EG000523 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 2176774-2178773 Theobroma cacao
Thecc1EG000523 2.0kb downstream 2.0kb downstream 6722 true scaffold_1: 2170052-2176773 Theobroma cacao
Thecc1EG000523 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 2170052-2172051 Theobroma cacao
Thecc1EG000523 5.0kb upstream 5.0kb upstream 9722 true scaffold_1: 2172052-2181773 Theobroma cacao
Thecc1EG000523 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 2176774-2181773 Theobroma cacao
Thecc1EG000523 5.0kb downstream 5.0kb downstream 9722 true scaffold_1: 2167052-2176773 Theobroma cacao
Thecc1EG000523 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 2167052-2172051 Theobroma cacao
Thecc1EG000523 10.0kb upstream 10.0kb upstream 14722 true scaffold_1: 2172052-2186773 Theobroma cacao
Thecc1EG000523 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 2176774-2186773 Theobroma cacao
Thecc1EG000523 10.0kb downstream 10.0kb downstream 14722 true scaffold_1: 2162052-2176773 Theobroma cacao
Thecc1EG000523 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 2162052-2172051 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840143 5264 Brassicales-Malvales View MSA
124343871 5266 SBM View MSA
124251405 5268 Malvidae View MSA
124071174 5270 Rosid View MSA
123739194 5271 Pentapetalae View MSA
122789460 5272 Eudicot View MSA
122047706 5273 Angiosperm View MSA
121350233 5274 Embryophyte View MSA
123381636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain