Gene : Thecc1EG000436 T. cacao v1.1

Defline:  (1 of 2) PTHR22952//PTHR22952:SF123 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // G-BOX-BINDING FACTOR 1 Genomic Order:  378
Name:  ? Thecc1EG000436 Secondary Identifier:  ? PAC:27432548

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000436 0.5kb upstream 0.5kb upstream 5073 true scaffold_1: 1788213-1793285 Theobroma cacao
Thecc1EG000436 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 1792786-1793285 Theobroma cacao
Thecc1EG000436 0.5kb downstream 0.5kb downstream 5073 true scaffold_1: 1787713-1792785 Theobroma cacao
Thecc1EG000436 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 1787713-1788212 Theobroma cacao
Thecc1EG000436 1.0kb upstream 1.0kb upstream 5573 true scaffold_1: 1788213-1793785 Theobroma cacao
Thecc1EG000436 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 1792786-1793785 Theobroma cacao
Thecc1EG000436 1.0kb downstream 1.0kb downstream 5573 true scaffold_1: 1787213-1792785 Theobroma cacao
Thecc1EG000436 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 1787213-1788212 Theobroma cacao
Thecc1EG000436 2.0kb upstream 2.0kb upstream 6573 true scaffold_1: 1788213-1794785 Theobroma cacao
Thecc1EG000436 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 1792786-1794785 Theobroma cacao
Thecc1EG000436 2.0kb downstream 2.0kb downstream 6573 true scaffold_1: 1786213-1792785 Theobroma cacao
Thecc1EG000436 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 1786213-1788212 Theobroma cacao
Thecc1EG000436 5.0kb upstream 5.0kb upstream 9573 true scaffold_1: 1788213-1797785 Theobroma cacao
Thecc1EG000436 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 1792786-1797785 Theobroma cacao
Thecc1EG000436 5.0kb downstream 5.0kb downstream 9573 true scaffold_1: 1783213-1792785 Theobroma cacao
Thecc1EG000436 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 1783213-1788212 Theobroma cacao
Thecc1EG000436 10.0kb upstream 10.0kb upstream 14573 true scaffold_1: 1788213-1802785 Theobroma cacao
Thecc1EG000436 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 1792786-1802785 Theobroma cacao
Thecc1EG000436 10.0kb downstream 10.0kb downstream 14573 true scaffold_1: 1778213-1792785 Theobroma cacao
Thecc1EG000436 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 1778213-1788212 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833481 5264 Brassicales-Malvales View MSA
124337722 5266 SBM View MSA
124253966 5268 Malvidae View MSA
124072155 5270 Rosid View MSA
123740041 5271 Pentapetalae View MSA
122791402 5272 Eudicot View MSA
122048438 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121351466 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain