Gene : Thecc1EG000711 T. cacao v1.1
Defline:  Maternal effect embryo arrest 59 Genomic Order:  620
Name:  ? Thecc1EG000711 Secondary Identifier:  ? PAC:27435123
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000711 0.5kb upstream 0.5kb upstream 1886 true scaffold_1: 3136500-3138385 Theobroma cacao
Thecc1EG000711 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3136500-3136999 Theobroma cacao
Thecc1EG000711 0.5kb downstream 0.5kb downstream 1886 true scaffold_1: 3137000-3138885 Theobroma cacao
Thecc1EG000711 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3138386-3138885 Theobroma cacao
Thecc1EG000711 1.0kb upstream 1.0kb upstream 2386 true scaffold_1: 3136000-3138385 Theobroma cacao
Thecc1EG000711 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3136000-3136999 Theobroma cacao
Thecc1EG000711 1.0kb downstream 1.0kb downstream 2386 true scaffold_1: 3137000-3139385 Theobroma cacao
Thecc1EG000711 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3138386-3139385 Theobroma cacao
Thecc1EG000711 2.0kb upstream 2.0kb upstream 3386 true scaffold_1: 3135000-3138385 Theobroma cacao
Thecc1EG000711 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3135000-3136999 Theobroma cacao
Thecc1EG000711 2.0kb downstream 2.0kb downstream 3386 true scaffold_1: 3137000-3140385 Theobroma cacao
Thecc1EG000711 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3138386-3140385 Theobroma cacao
Thecc1EG000711 5.0kb upstream 5.0kb upstream 6386 true scaffold_1: 3132000-3138385 Theobroma cacao
Thecc1EG000711 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3132000-3136999 Theobroma cacao
Thecc1EG000711 5.0kb downstream 5.0kb downstream 6386 true scaffold_1: 3137000-3143385 Theobroma cacao
Thecc1EG000711 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3138386-3143385 Theobroma cacao
Thecc1EG000711 10.0kb upstream 10.0kb upstream 11386 true scaffold_1: 3127000-3138385 Theobroma cacao
Thecc1EG000711 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3127000-3136999 Theobroma cacao
Thecc1EG000711 10.0kb downstream 10.0kb downstream 11386 true scaffold_1: 3137000-3148385 Theobroma cacao
Thecc1EG000711 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3138386-3148385 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834087 5264 Brassicales-Malvales View MSA
124341528 5266 SBM View MSA
124246284 5268 Malvidae View MSA
124070606 5270 Rosid View MSA
123741375 5271 Pentapetalae View MSA
122793550 5272 Eudicot View MSA
122048217 5273 Angiosperm View MSA
121345828 5274 Embryophyte View MSA
123380277 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain