Gene : Thecc1EG000850 T. cacao v1.1
Defline:  (1 of 8) 1.14.13.132//1.14.99.7 - Squalene monooxygenase / Squalene epoxidase // Transferred entry: 1.14.13.132 Genomic Order:  745
Name:  ? Thecc1EG000850 Secondary Identifier:  ? PAC:27437295
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2541 Theobroma cacao pathologic  
Tcacao PWY-5670 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000850 0.5kb upstream 0.5kb upstream 12324 true scaffold_1: 3775501-3787824 Theobroma cacao
Thecc1EG000850 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3775501-3776000 Theobroma cacao
Thecc1EG000850 0.5kb downstream 0.5kb downstream 12324 true scaffold_1: 3776001-3788324 Theobroma cacao
Thecc1EG000850 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3787825-3788324 Theobroma cacao
Thecc1EG000850 1.0kb upstream 1.0kb upstream 12824 true scaffold_1: 3775001-3787824 Theobroma cacao
Thecc1EG000850 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3775001-3776000 Theobroma cacao
Thecc1EG000850 1.0kb downstream 1.0kb downstream 12824 true scaffold_1: 3776001-3788824 Theobroma cacao
Thecc1EG000850 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3787825-3788824 Theobroma cacao
Thecc1EG000850 2.0kb upstream 2.0kb upstream 13824 true scaffold_1: 3774001-3787824 Theobroma cacao
Thecc1EG000850 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3774001-3776000 Theobroma cacao
Thecc1EG000850 2.0kb downstream 2.0kb downstream 13824 true scaffold_1: 3776001-3789824 Theobroma cacao
Thecc1EG000850 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3787825-3789824 Theobroma cacao
Thecc1EG000850 5.0kb upstream 5.0kb upstream 16824 true scaffold_1: 3771001-3787824 Theobroma cacao
Thecc1EG000850 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3771001-3776000 Theobroma cacao
Thecc1EG000850 5.0kb downstream 5.0kb downstream 16824 true scaffold_1: 3776001-3792824 Theobroma cacao
Thecc1EG000850 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3787825-3792824 Theobroma cacao
Thecc1EG000850 10.0kb upstream 10.0kb upstream 21824 true scaffold_1: 3766001-3787824 Theobroma cacao
Thecc1EG000850 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3766001-3776000 Theobroma cacao
Thecc1EG000850 10.0kb downstream 10.0kb downstream 21824 true scaffold_1: 3776001-3797824 Theobroma cacao
Thecc1EG000850 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3787825-3797824 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838211 5264 Brassicales-Malvales View MSA
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain