Gene : Thecc1EG001036 T. cacao v1.1
Defline:  (1 of 2) 4.1.99.12 - 3,4-dihydroxy-2-butanone-4-phosphate synthase / L-3,4-dihydroxybutan-2-one-4-phosphate synthase Genomic Order:  915
Name:  ? Thecc1EG001036 Secondary Identifier:  ? PAC:27436920
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao RIBOSYN2-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001036 0.5kb upstream 0.5kb upstream 6847 true scaffold_1: 4888729-4895575 Theobroma cacao
Thecc1EG001036 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4895076-4895575 Theobroma cacao
Thecc1EG001036 0.5kb downstream 0.5kb downstream 6847 true scaffold_1: 4888229-4895075 Theobroma cacao
Thecc1EG001036 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4888229-4888728 Theobroma cacao
Thecc1EG001036 1.0kb upstream 1.0kb upstream 7347 true scaffold_1: 4888729-4896075 Theobroma cacao
Thecc1EG001036 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4895076-4896075 Theobroma cacao
Thecc1EG001036 1.0kb downstream 1.0kb downstream 7347 true scaffold_1: 4887729-4895075 Theobroma cacao
Thecc1EG001036 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4887729-4888728 Theobroma cacao
Thecc1EG001036 2.0kb upstream 2.0kb upstream 8347 true scaffold_1: 4888729-4897075 Theobroma cacao
Thecc1EG001036 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4895076-4897075 Theobroma cacao
Thecc1EG001036 2.0kb downstream 2.0kb downstream 8347 true scaffold_1: 4886729-4895075 Theobroma cacao
Thecc1EG001036 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4886729-4888728 Theobroma cacao
Thecc1EG001036 5.0kb upstream 5.0kb upstream 11347 true scaffold_1: 4888729-4900075 Theobroma cacao
Thecc1EG001036 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4895076-4900075 Theobroma cacao
Thecc1EG001036 5.0kb downstream 5.0kb downstream 11347 true scaffold_1: 4883729-4895075 Theobroma cacao
Thecc1EG001036 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4883729-4888728 Theobroma cacao
Thecc1EG001036 10.0kb upstream 10.0kb upstream 16347 true scaffold_1: 4888729-4905075 Theobroma cacao
Thecc1EG001036 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4895076-4905075 Theobroma cacao
Thecc1EG001036 10.0kb downstream 10.0kb downstream 16347 true scaffold_1: 4878729-4895075 Theobroma cacao
Thecc1EG001036 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4878729-4888728 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041066 5273 Angiosperm View MSA
123815265 5264 Brassicales-Malvales Singleton cluster - no MSA
124311701 5266 SBM Singleton cluster - no MSA
124248360 5268 Malvidae View MSA
124067680 5270 Rosid View MSA
123753464 5271 Pentapetalae View MSA
122788466 5272 Eudicot View MSA
121346573 5274 Embryophyte View MSA
123428678 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain