Gene : Thecc1EG000997 T. cacao v1.1
Defline:  (1 of 1) PTHR12565//PTHR12565:SF119 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  880
Name:  ? Thecc1EG000997 Secondary Identifier:  ? PAC:27432591
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000997 0.5kb upstream 0.5kb upstream 1838 true scaffold_1: 4646211-4648048 Theobroma cacao
Thecc1EG000997 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4646211-4646710 Theobroma cacao
Thecc1EG000997 0.5kb downstream 0.5kb downstream 1838 true scaffold_1: 4646711-4648548 Theobroma cacao
Thecc1EG000997 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4648049-4648548 Theobroma cacao
Thecc1EG000997 1.0kb upstream 1.0kb upstream 2338 true scaffold_1: 4645711-4648048 Theobroma cacao
Thecc1EG000997 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4645711-4646710 Theobroma cacao
Thecc1EG000997 1.0kb downstream 1.0kb downstream 2338 true scaffold_1: 4646711-4649048 Theobroma cacao
Thecc1EG000997 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4648049-4649048 Theobroma cacao
Thecc1EG000997 2.0kb upstream 2.0kb upstream 3338 true scaffold_1: 4644711-4648048 Theobroma cacao
Thecc1EG000997 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4644711-4646710 Theobroma cacao
Thecc1EG000997 2.0kb downstream 2.0kb downstream 3338 true scaffold_1: 4646711-4650048 Theobroma cacao
Thecc1EG000997 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4648049-4650048 Theobroma cacao
Thecc1EG000997 5.0kb upstream 5.0kb upstream 6338 true scaffold_1: 4641711-4648048 Theobroma cacao
Thecc1EG000997 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4641711-4646710 Theobroma cacao
Thecc1EG000997 5.0kb downstream 5.0kb downstream 6338 true scaffold_1: 4646711-4653048 Theobroma cacao
Thecc1EG000997 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4648049-4653048 Theobroma cacao
Thecc1EG000997 10.0kb upstream 10.0kb upstream 11338 true scaffold_1: 4636711-4648048 Theobroma cacao
Thecc1EG000997 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4636711-4646710 Theobroma cacao
Thecc1EG000997 10.0kb downstream 10.0kb downstream 11338 true scaffold_1: 4646711-4658048 Theobroma cacao
Thecc1EG000997 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4648049-4658048 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828996 5264 Brassicales-Malvales View MSA
124337585 5266 SBM View MSA
124244615 5268 Malvidae View MSA
124070702 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain