Gene : Thecc1EG000998 T. cacao v1.1
Defline:  (1 of 1) PTHR16301 - IMPACT-RELATED Genomic Order:  881
Name:  ? Thecc1EG000998 Secondary Identifier:  ? PAC:27436908
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000998 0.5kb upstream 0.5kb upstream 3932 true scaffold_1: 4646948-4650879 Theobroma cacao
Thecc1EG000998 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4650380-4650879 Theobroma cacao
Thecc1EG000998 0.5kb downstream 0.5kb downstream 3932 true scaffold_1: 4646448-4650379 Theobroma cacao
Thecc1EG000998 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4646448-4646947 Theobroma cacao
Thecc1EG000998 1.0kb upstream 1.0kb upstream 4432 true scaffold_1: 4646948-4651379 Theobroma cacao
Thecc1EG000998 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4650380-4651379 Theobroma cacao
Thecc1EG000998 1.0kb downstream 1.0kb downstream 4432 true scaffold_1: 4645948-4650379 Theobroma cacao
Thecc1EG000998 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4645948-4646947 Theobroma cacao
Thecc1EG000998 2.0kb upstream 2.0kb upstream 5432 true scaffold_1: 4646948-4652379 Theobroma cacao
Thecc1EG000998 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4650380-4652379 Theobroma cacao
Thecc1EG000998 2.0kb downstream 2.0kb downstream 5432 true scaffold_1: 4644948-4650379 Theobroma cacao
Thecc1EG000998 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4644948-4646947 Theobroma cacao
Thecc1EG000998 5.0kb upstream 5.0kb upstream 8432 true scaffold_1: 4646948-4655379 Theobroma cacao
Thecc1EG000998 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4650380-4655379 Theobroma cacao
Thecc1EG000998 5.0kb downstream 5.0kb downstream 8432 true scaffold_1: 4641948-4650379 Theobroma cacao
Thecc1EG000998 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4641948-4646947 Theobroma cacao
Thecc1EG000998 10.0kb upstream 10.0kb upstream 13432 true scaffold_1: 4646948-4660379 Theobroma cacao
Thecc1EG000998 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4650380-4660379 Theobroma cacao
Thecc1EG000998 10.0kb downstream 10.0kb downstream 13432 true scaffold_1: 4636948-4650379 Theobroma cacao
Thecc1EG000998 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4636948-4646947 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827548 5264 Brassicales-Malvales View MSA
124338261 5266 SBM View MSA
124240109 5268 Malvidae View MSA
124061483 5270 Rosid View MSA
123739844 5271 Pentapetalae View MSA
122787170 5272 Eudicot View MSA
122046468 5273 Angiosperm View MSA
121347783 5274 Embryophyte View MSA
123425270 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain