Gene : Thecc1EG001481 T. cacao v1.1
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  1272
Name:  ? Thecc1EG001481 Secondary Identifier:  ? PAC:27434215
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001481 0.5kb upstream 0.5kb upstream 2895 true scaffold_1: 7404713-7407607 Theobroma cacao
Thecc1EG001481 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7407108-7407607 Theobroma cacao
Thecc1EG001481 0.5kb downstream 0.5kb downstream 2895 true scaffold_1: 7404213-7407107 Theobroma cacao
Thecc1EG001481 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7404213-7404712 Theobroma cacao
Thecc1EG001481 1.0kb upstream 1.0kb upstream 3395 true scaffold_1: 7404713-7408107 Theobroma cacao
Thecc1EG001481 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7407108-7408107 Theobroma cacao
Thecc1EG001481 1.0kb downstream 1.0kb downstream 3395 true scaffold_1: 7403713-7407107 Theobroma cacao
Thecc1EG001481 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7403713-7404712 Theobroma cacao
Thecc1EG001481 2.0kb upstream 2.0kb upstream 4395 true scaffold_1: 7404713-7409107 Theobroma cacao
Thecc1EG001481 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7407108-7409107 Theobroma cacao
Thecc1EG001481 2.0kb downstream 2.0kb downstream 4395 true scaffold_1: 7402713-7407107 Theobroma cacao
Thecc1EG001481 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7402713-7404712 Theobroma cacao
Thecc1EG001481 5.0kb upstream 5.0kb upstream 7395 true scaffold_1: 7404713-7412107 Theobroma cacao
Thecc1EG001481 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7407108-7412107 Theobroma cacao
Thecc1EG001481 5.0kb downstream 5.0kb downstream 7395 true scaffold_1: 7399713-7407107 Theobroma cacao
Thecc1EG001481 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7399713-7404712 Theobroma cacao
Thecc1EG001481 10.0kb upstream 10.0kb upstream 12395 true scaffold_1: 7404713-7417107 Theobroma cacao
Thecc1EG001481 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7407108-7417107 Theobroma cacao
Thecc1EG001481 10.0kb downstream 10.0kb downstream 12395 true scaffold_1: 7394713-7407107 Theobroma cacao
Thecc1EG001481 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7394713-7404712 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834713 5264 Brassicales-Malvales View MSA
124344713 5266 SBM View MSA
124240180 5268 Malvidae View MSA
124061930 5270 Rosid View MSA
123740594 5271 Pentapetalae View MSA
122785739 5272 Eudicot View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain