Gene : Thecc1EG001459 T. cacao v1.1
Defline:  (1 of 1) PTHR11177//PTHR11177:SF187 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  1253
Name:  ? Thecc1EG001459 Secondary Identifier:  ? PAC:27432073
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001459 0.5kb upstream 0.5kb upstream 3070 true scaffold_1: 7266445-7269514 Theobroma cacao
Thecc1EG001459 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7266445-7266944 Theobroma cacao
Thecc1EG001459 0.5kb downstream 0.5kb downstream 3070 true scaffold_1: 7266945-7270014 Theobroma cacao
Thecc1EG001459 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7269515-7270014 Theobroma cacao
Thecc1EG001459 1.0kb upstream 1.0kb upstream 3570 true scaffold_1: 7265945-7269514 Theobroma cacao
Thecc1EG001459 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7265945-7266944 Theobroma cacao
Thecc1EG001459 1.0kb downstream 1.0kb downstream 3570 true scaffold_1: 7266945-7270514 Theobroma cacao
Thecc1EG001459 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7269515-7270514 Theobroma cacao
Thecc1EG001459 2.0kb upstream 2.0kb upstream 4570 true scaffold_1: 7264945-7269514 Theobroma cacao
Thecc1EG001459 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7264945-7266944 Theobroma cacao
Thecc1EG001459 2.0kb downstream 2.0kb downstream 4570 true scaffold_1: 7266945-7271514 Theobroma cacao
Thecc1EG001459 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7269515-7271514 Theobroma cacao
Thecc1EG001459 5.0kb upstream 5.0kb upstream 7570 true scaffold_1: 7261945-7269514 Theobroma cacao
Thecc1EG001459 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7261945-7266944 Theobroma cacao
Thecc1EG001459 5.0kb downstream 5.0kb downstream 7570 true scaffold_1: 7266945-7274514 Theobroma cacao
Thecc1EG001459 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7269515-7274514 Theobroma cacao
Thecc1EG001459 10.0kb upstream 10.0kb upstream 12570 true scaffold_1: 7256945-7269514 Theobroma cacao
Thecc1EG001459 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7256945-7266944 Theobroma cacao
Thecc1EG001459 10.0kb downstream 10.0kb downstream 12570 true scaffold_1: 7266945-7279514 Theobroma cacao
Thecc1EG001459 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7269515-7279514 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824590 5264 Brassicales-Malvales View MSA
124347402 5266 SBM View MSA
124246576 5268 Malvidae View MSA
124072700 5270 Rosid View MSA
123745808 5271 Pentapetalae View MSA
122795132 5272 Eudicot View MSA
122051321 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain