Gene : Thecc1EG001428 T. cacao v1.1
Defline:  (1 of 2) K02879 - large subunit ribosomal protein L17 (RP-L17, MRPL17, rplQ) Genomic Order:  1227
Name:  ? Thecc1EG001428 Secondary Identifier:  ? PAC:27435455
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001428 0.5kb upstream 0.5kb upstream 3362 true scaffold_1: 7095490-7098851 Theobroma cacao
Thecc1EG001428 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7095490-7095989 Theobroma cacao
Thecc1EG001428 0.5kb downstream 0.5kb downstream 3362 true scaffold_1: 7095990-7099351 Theobroma cacao
Thecc1EG001428 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7098852-7099351 Theobroma cacao
Thecc1EG001428 1.0kb upstream 1.0kb upstream 3862 true scaffold_1: 7094990-7098851 Theobroma cacao
Thecc1EG001428 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7094990-7095989 Theobroma cacao
Thecc1EG001428 1.0kb downstream 1.0kb downstream 3862 true scaffold_1: 7095990-7099851 Theobroma cacao
Thecc1EG001428 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7098852-7099851 Theobroma cacao
Thecc1EG001428 2.0kb upstream 2.0kb upstream 4862 true scaffold_1: 7093990-7098851 Theobroma cacao
Thecc1EG001428 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7093990-7095989 Theobroma cacao
Thecc1EG001428 2.0kb downstream 2.0kb downstream 4862 true scaffold_1: 7095990-7100851 Theobroma cacao
Thecc1EG001428 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7098852-7100851 Theobroma cacao
Thecc1EG001428 5.0kb upstream 5.0kb upstream 7862 true scaffold_1: 7090990-7098851 Theobroma cacao
Thecc1EG001428 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7090990-7095989 Theobroma cacao
Thecc1EG001428 5.0kb downstream 5.0kb downstream 7862 true scaffold_1: 7095990-7103851 Theobroma cacao
Thecc1EG001428 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7098852-7103851 Theobroma cacao
Thecc1EG001428 10.0kb upstream 10.0kb upstream 12862 true scaffold_1: 7085990-7098851 Theobroma cacao
Thecc1EG001428 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7085990-7095989 Theobroma cacao
Thecc1EG001428 10.0kb downstream 10.0kb downstream 12862 true scaffold_1: 7095990-7108851 Theobroma cacao
Thecc1EG001428 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7098852-7108851 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832255 5264 Brassicales-Malvales View MSA
124343042 5266 SBM View MSA
124243000 5268 Malvidae View MSA
124060746 5270 Rosid View MSA
123739029 5271 Pentapetalae View MSA
122790801 5272 Eudicot View MSA
122045514 5273 Angiosperm View MSA
121347003 5274 Embryophyte View MSA
123426570 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain