Gene : Thecc1EG001398 T. cacao v1.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1204
Name:  ? Thecc1EG001398 Secondary Identifier:  ? PAC:27433230
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001398 0.5kb upstream 0.5kb upstream 2341 true scaffold_1: 6903973-6906313 Theobroma cacao
Thecc1EG001398 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6903973-6904472 Theobroma cacao
Thecc1EG001398 0.5kb downstream 0.5kb downstream 2341 true scaffold_1: 6904473-6906813 Theobroma cacao
Thecc1EG001398 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6906314-6906813 Theobroma cacao
Thecc1EG001398 1.0kb upstream 1.0kb upstream 2841 true scaffold_1: 6903473-6906313 Theobroma cacao
Thecc1EG001398 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6903473-6904472 Theobroma cacao
Thecc1EG001398 1.0kb downstream 1.0kb downstream 2841 true scaffold_1: 6904473-6907313 Theobroma cacao
Thecc1EG001398 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6906314-6907313 Theobroma cacao
Thecc1EG001398 2.0kb upstream 2.0kb upstream 3841 true scaffold_1: 6902473-6906313 Theobroma cacao
Thecc1EG001398 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6902473-6904472 Theobroma cacao
Thecc1EG001398 2.0kb downstream 2.0kb downstream 3841 true scaffold_1: 6904473-6908313 Theobroma cacao
Thecc1EG001398 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6906314-6908313 Theobroma cacao
Thecc1EG001398 5.0kb upstream 5.0kb upstream 6841 true scaffold_1: 6899473-6906313 Theobroma cacao
Thecc1EG001398 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6899473-6904472 Theobroma cacao
Thecc1EG001398 5.0kb downstream 5.0kb downstream 6841 true scaffold_1: 6904473-6911313 Theobroma cacao
Thecc1EG001398 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6906314-6911313 Theobroma cacao
Thecc1EG001398 10.0kb upstream 10.0kb upstream 11841 true scaffold_1: 6894473-6906313 Theobroma cacao
Thecc1EG001398 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6894473-6904472 Theobroma cacao
Thecc1EG001398 10.0kb downstream 10.0kb downstream 11841 true scaffold_1: 6904473-6916313 Theobroma cacao
Thecc1EG001398 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6906314-6916313 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833487 5264 Brassicales-Malvales View MSA
124351138 5266 SBM View MSA
124239746 5268 Malvidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain